RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 JUPP14923 745 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 FOLR1P15328 257 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 NELFEP18615 380 aaKnown RBP9.09□□□□□ -0.95
RFX3-201ENST00000302303 CDH3P22223 829 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 SERPINB3P29508 390 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 BCL6P41182 706 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 SCTRP47872 440 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 PIK3CGP48736 1102 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 HTR6P50406 440 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CCR8P51685 355 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CCNG1P51959 295 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 PKNOX1P55347 436 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 NAA20P61599 178 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 E2F1Q01094 437 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 IRF8Q02556 426 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 ASPHQ12797 758 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 SLBPQ14493 270 aaKnown RBP eCLIP9.09□□□□□ -0.95
RFX3-201ENST00000302303 KCNAB1Q14722 419 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 C16orf72Q14CZ0 275 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CFAP157Q5JU67 520 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CACHD1Q5VU97 1274 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CLEC6AQ6EIG7 209 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CGB2Q6NT52 195 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 ARMC6Q6NXE6 501 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 GPRIN3Q6ZVF9 776 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 RNF44Q7L0R7 432 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 MAVSQ7Z434 540 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 ALYREFQ86V81 257 aaKnown RBP9.09□□□□□ -0.95
RFX3-201ENST00000302303 OR4N4Q8N0Y3 316 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 D2HGDHQ8N465 521 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 BMPERQ8N8U9 685 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 C19orf47Q8N9M1 422 aaKnown RBP9.09□□□□□ -0.95
RFX3-201ENST00000302303 OR7G3Q8NG95 312 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CREB3L4Q8TEY5 395 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 PPP4R1Q8TF05 950 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 GRAMD1AQ96CP6 724 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 PTCD3Q96EY7 689 aaKnown RBP9.09□□□□□ -0.95
RFX3-201ENST00000302303 CCDC74BQ96LY2 380 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 ZNF285Q96NJ3 590 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 NT5DC2Q9H857 520 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 THAP1Q9NVV9 213 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 SIDT1Q9NXL6 827 aaKnown RBP9.09□□□□□ -0.95
RFX3-201ENST00000302303 ANKMY1Q9P2S6 941 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 TRPS1Q9UHF7 1281 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 SNX7Q9UNH6 387 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 TSC22D4Q9Y3Q8 395 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 CCL27Q9Y4X3 112 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 DNAJC15Q9Y5T4 150 aa9.09□□□□□ -0.95
RFX3-201ENST00000302303 TRBC2A0A5B9 178 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 PMS2P1A4D2B8 440 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 HYAL3O43820 417 aaPredicted RBP9.08□□□□□ -0.96
RFX3-201ENST00000302303 MED26O95402 600 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 ETHE1O95571 254 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 ZBTB11O95625 1053 aaPredicted RBP9.08□□□□□ -0.96
RFX3-201ENST00000302303 CAPN1P07384 714 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 MSL3P1P0C860 447 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 HRH2P25021 359 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 CCKBRP32239 447 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 HNF4AP41235 474 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 GCGRP47871 477 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 SEPHS1P49903 392 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 NEK2P51955 445 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 SIM1P81133 766 aaPredicted RBP9.08□□□□□ -0.96
RFX3-201ENST00000302303 SPIDRQ14159 915 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 ZRSR2Q15696 482 aaKnown RBP9.08□□□□□ -0.96
RFX3-201ENST00000302303 RBBP7Q16576 425 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 CPSF6Q16630 551 aaKnown RBP eCLIP9.08□□□□□ -0.96
RFX3-201ENST00000302303 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 KANK2Q63ZY3 851 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 TMIGD1Q6UXZ0 262 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 DGLUCYQ7Z3D6 616 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 CDYL2Q8N8U2 506 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 WDR48Q8TAF3 677 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 USP7Q93009 1102 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 TCTN2Q96GX1 697 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 C7orf26Q96N11 449 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 DPYSL5Q9BPU6 564 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 EFCAB11Q9BUY7 163 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 RHBGQ9H310 441 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 ACTR8Q9H981 624 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.08□□□□□ -0.96
RFX3-201ENST00000302303 RAP2CQ9Y3L5 183 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 TRAF6Q9Y4K3 522 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 ANGPTL3Q9Y5C1 460 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 PTGDR2Q9Y5Y4 395 aa9.08□□□□□ -0.96
RFX3-201ENST00000302303 A0A0J9YVX5 310 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 SERTM1A2A2V5 107 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 DCDC2BA2VCK2 349 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 TCP11X1B4DZS4 312 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 C4orf51C9J302 202 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 FFAR3O14843 346 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 GPR42O15529 346 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 P2RX6O15547 441 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 ZW10O43264 779 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 EDF1O60869 148 aaKnown RBP9.07□□□□□ -0.96
RFX3-201ENST00000302303 CCNDBP1O95273 360 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 HGFP14210 728 aa9.07□□□□□ -0.96
RFX3-201ENST00000302303 EZRP15311 586 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms