RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PIP5K1BO14986 540 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 NSG1P42857 185 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 MERTKQ12866 999 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 GPR68Q15743 365 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 MRPL45Q9BRJ2 306 aaKnown RBP11.77□□□□□ -0.52
PCF11-201ENST00000298281 NUSAP1Q9BXS6 441 aaKnown RBP11.77□□□□□ -0.52
PCF11-201ENST00000298281 EBPLQ9BY08 206 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 SLCO1B3Q9NPD5 702 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 A6NHS1 94 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 TNFSF12O43508 249 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 GRIA1P42261 906 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 PPIGQ13427 754 aaKnown RBP eCLIP11.77□□□□□ -0.539e-6■■□□□ 12.8
PCF11-201ENST00000298281 TNFRSF25Q93038 417 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 FBXW5Q969U6 566 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 CENPNQ96H22 339 aaPredicted RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 ZNF282Q9UDV7 671 aaPredicted RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 HEATR1Q9H583 2144 aaKnown RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 SAP18O00422 153 aaKnown RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 CHEK1O14757 476 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 SNCGO76070 127 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 PRAMEF1O95521 474 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 NR2C1P13056 603 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 SLC3A1Q07837 685 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 ZNF423Q2M1K9 1284 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 ALG2Q9H553 416 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 TIGARQ9NQ88 270 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 CDC14AQ9UNH5 594 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 FABP12A6NFH5 140 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 SLC22A2O15244 555 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 CASP7P55210 303 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 CTBP2P56545 445 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 FSTL1Q12841 308 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 RALGPS2Q86X27 583 aaPredicted RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 FAM46DQ8NEK8 389 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 OR4C15Q8NGM1 316 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 SEC14L1Q92503 715 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 INPP4AQ96PE3 977 aaPredicted RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 SEMA6CQ9H3T2 930 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 SSU72Q9NP77 194 aaKnown RBP11.77□□□□□ -0.53
PCF11-201ENST00000298281 ACP6Q9NPH0 428 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 DUXAA6NLW8 204 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 CYB5BO43169 146 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 MMP3P08254 477 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 LIMK2P53671 638 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 GTF2H2Q13888 395 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 PLEKHG4Q58EX7 1191 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 MPP7Q5T2T1 576 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 GTF2H2CQ6P1K8 395 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 TMEM41AQ96HV5 264 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 UNC93B1Q9H1C4 597 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
PCF11-201ENST00000298281 E9PI62 339 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 H7C417 338 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 PLSCR1O15162 318 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 MATN3O15232 486 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 MARCKSL1P49006 195 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 DCDC1P59894 354 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 RNF4P78317 190 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 TLE3Q04726 772 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 MFSD13AQ14CX5 517 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 FIGNL1Q6PIW4 674 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 ANKS1BQ7Z6G8 1248 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 ZNF536O15090 1300 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 INSIG1O15503 277 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 CILPO75339 1184 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 LYPLA1O75608 230 aaPredicted RBP11.76□□□□□ -0.53
PCF11-201ENST00000298281 AGR2O95994 175 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 LCKP06239 509 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 CBLP22681 906 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 F2RP25116 425 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 MPIP34949 423 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 KHKP50053 298 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 CLEC12AQ5QGZ9 265 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 TMEM126BQ8IUX1 230 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 SHDQ96IW2 340 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 SH2B3Q9UQQ2 575 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 PCDHGA5Q9Y5G8 931 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 A0A1B0GV50 99 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 ENPP3O14638 875 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 AKR1C4P17516 323 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 FXYD6P3P58550 94 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 CLCQ05315 142 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 RFTN1Q14699 578 aaPredicted RBP11.76□□□□□ -0.53
PCF11-201ENST00000298281 GPR21Q99679 349 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 MECRQ9BV79 373 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 TCAF1Q9Y4C2 921 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 PCM1Q15154 2024 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 IFNA5P01569 189 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 ALPPP05187 535 aa11.76□□□□□ -0.53
PCF11-201ENST00000298281 GSTM2P28161 218 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms