RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 HNRNPCL1O60812 293 aaKnown RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ACSL3O95573 720 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CTSBP07858 339 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 EFTUD2Q15029 972 aaKnown RBP eCLIP11.59□□□□□ -0.558e-12■■■■■ 30.8
HMGB2-201ENST00000296503 RAPH1Q70E73 1250 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 SPATA21Q7Z572 469 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 RELL1Q8IUW5 271 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ZNF655Q8N720 491 aaPredicted RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ANKRD49Q8WVL7 239 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 GPR22Q99680 433 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 SELENOSQ9BQE4 189 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CDC42EP4Q9H3Q1 356 aaKnown RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CCDC177Q9NQR7 707 aaPredicted RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 IL17BQ9UHF5 180 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 KCND3Q9UK17 655 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CDC7O00311 574 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 RIPK2O43353 540 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SHBGP04278 402 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 KRT16P08779 473 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 ENO2P09104 434 aaPredicted RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 CCDC166P0CW27 439 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 AGXTP21549 392 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 ALAS2P22557 587 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 F8A1P23610 371 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 RPS6KA3P51812 740 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SLC18A1P54219 525 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 AP1S2P56377 157 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 VSX2P58304 361 aaPredicted RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 CYP4F2P78329 520 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 ABATP80404 500 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 COL9A2Q14055 689 aaPredicted RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SLC29A2Q14542 456 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 TAF11Q15544 211 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 C16orf46Q6P387 395 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 LRRC56Q8IYG6 542 aaPredicted RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SPATA6LQ8N4H0 392 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 CT55Q8WUE5 264 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SNRNP27Q8WVK2 155 aaKnown RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SLC45A3Q96JT2 553 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 NDC1Q9BTX1 674 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 CCDC28BQ9BUN5 200 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 UNKQ9C0B0 810 aaKnown RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 PCBD2Q9H0N5 130 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SLC6A20Q9NP91 592 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 STARD5Q9NSY2 213 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 IKZF3Q9UKT9 509 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 SNX7Q9UNH6 387 aa11.58□□□□□ -0.56
HMGB2-201ENST00000296503 MRPS18BQ9Y676 258 aaKnown RBP11.58□□□□□ -0.56
HMGB2-201ENST00000296503 NPEPPSL1A6NEC2 478 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ZNF891A8MT65 544 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 NKX2-8O15522 239 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ZSCAN9O15535 394 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 SRPX2O60687 465 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 CTSVO60911 334 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 EIF2S1P05198 315 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 RAB10P61026 200 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 TBPL1P62380 186 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 RPS15P62841 145 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 DNASE1L3Q13609 305 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 TCTE1Q5JU00 501 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 C1orf189Q5VU69 101 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PRAMEF13Q5VWM6 474 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 CAPN13Q6MZZ7 669 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 FBXO42Q6P3S6 717 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 FRA10AC1Q70Z53 315 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 EXOC3L1Q86VI1 746 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.57□□□□□ -0.569e-15■■□□□ 11.9
HMGB2-201ENST00000296503 DSELQ8IZU8 1212 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ATL1Q8WXF7 558 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ITFG2Q969R8 447 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 MAGEB18Q96M61 343 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 LRFN5Q96NI6 719 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 TSC22D3Q99576 134 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 EGFL8Q99944 293 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 CHST8Q9H2A9 424 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PAPOLBQ9NRJ5 636 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PCMTD2Q9NV79 361 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 NDOR1Q9UHB4 597 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 FARSAQ9Y285 508 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 KLK4Q9Y5K2 254 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 SEC16AO15027 2179 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 OR2A25A4D2G3 310 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 H7BY64 318 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 NRP2O60462 931 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PRKAR1AP10644 381 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 RASSF2P50749 326 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ARSFP54793 590 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 MC1RQ01726 317 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 RHDQ02161 417 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 TSNQ15631 228 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PTCHD3Q3KNS1 767 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 UBAP2Q5T6F2 1119 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 MROH9Q5TGP6 573 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 FRMPD2BQ6IN97 320 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms