RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CCNL2Q96S94 520 aaPredicted RBP25.71■■□□□ 1.71
SSU72-201ENST00000291386 DPH2Q9BQC3 489 aaPredicted RBP25.71■■□□□ 1.71
SSU72-201ENST00000291386 SLC7A5P2Q9GIP4 190 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 IRAK4Q9NWZ3 460 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 DCDC2Q9UHG0 476 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 LGALS13Q9UHV8 139 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 PLAAQ9Y263 795 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 SEC16AO15027 2179 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 CCDC151A5D8V7 595 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 MEN1O00255 615 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 TXNDC9O14530 226 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 TERTO14746 1132 aaKnown RBP25.7■■□□□ 1.7
SSU72-201ENST00000291386 GFAPP14136 432 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 ITPKBP27987 946 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 UCNP55089 124 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 PCBP2Q15366 365 aaKnown RBP eCLIP25.7■■□□□ 1.74e-9■□□□□ 9.8
SSU72-201ENST00000291386 FAM214AQ32MH5 1076 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 FBXO48Q5FWF7 155 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 MANEAQ5SRI9 462 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 BROXQ5VW32 411 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 PLD3Q8IV08 490 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 RERGQ96A58 199 aaPredicted RBP25.7■■□□□ 1.7
SSU72-201ENST00000291386 NDC1Q9BTX1 674 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 FAM117AQ9C073 453 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 EHD1Q9H4M9 534 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 ASB1Q9Y576 335 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 PCDHGA4Q9Y5G9 962 aa25.7■■□□□ 1.7
SSU72-201ENST00000291386 LOC101059948A0A1B0GTJ6 334 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 TRBC2A0A5B9 178 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 TLDC2A0PJX2 215 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 GOLGA8RI6L899 631 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 CCNT2O60583 730 aaKnown RBP25.69■■□□□ 1.7
SSU72-201ENST00000291386 ERLIN1O75477 346 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 SBK3P0C264 359 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 REEP5Q00765 189 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 PCDH1Q08174 1060 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 E2F2Q14209 437 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 PDK4Q16654 411 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 PFKFB4Q16877 469 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 ATG9BQ674R7 924 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 SLCO4C1Q6ZQN7 724 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 TMPRSS11BQ86T26 416 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 MFSD9Q8NBP5 474 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 RNF31Q96EP0 1072 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 GBP5Q96PP8 586 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 EFHD1Q9BUP0 239 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 TMEM216Q9P0N5 145 aa25.69■■□□□ 1.7
SSU72-201ENST00000291386 TNPO3Q9Y5L0 923 aaKnown RBP25.69■■□□□ 1.7
SSU72-201ENST00000291386 FER1L5A0AVI2 2057 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 STX16-NPEPL1H3BU86 382 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 K7EPI3 171 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 STX16O14662 325 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 LCMT2O60294 686 aaKnown RBP25.68■■□□□ 1.7
SSU72-201ENST00000291386 C1GALT1C1LP0DN25 315 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 BCL6P41182 706 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 AGTR2P50052 363 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 VN1R4Q7Z5H5 301 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 IQCKQ8N0W5 287 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 TBC1D19Q8N5T2 526 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 CSNK1A1LQ8N752 337 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 TM4SF19Q96DZ7 209 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 WDR34Q96EX3 536 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 AIF1LQ9BQI0 150 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 PITHD1Q9GZP4 211 aaPredicted RBP25.68■■□□□ 1.7
SSU72-201ENST00000291386 AKIRIN1Q9H9L7 192 aaPredicted RBP25.68■■□□□ 1.7
SSU72-201ENST00000291386 STARD5Q9NSY2 213 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 CUTCQ9NTM9 273 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 TXLNGQ9NUQ3 528 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 CPSF2Q9P2I0 782 aaKnown RBP25.68■■□□□ 1.7
SSU72-201ENST00000291386 COPG2Q9UBF2 871 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 OPTCQ9UBM4 332 aa25.68■■□□□ 1.7
SSU72-201ENST00000291386 ZFHX4Q86UP3 3567 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 FEZF1A0PJY2 475 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 HYKKA2RU49 373 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 TK2O00142 265 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 CLGNO14967 610 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 ONECUT2O95948 504 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 EIF2S1P05198 315 aaKnown RBP25.67■■□□□ 1.7
SSU72-201ENST00000291386 EPORP19235 508 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 CXCR2P25025 360 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 SLC18A2Q05940 514 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 GARNL3Q5VVW2 1013 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 ARHGEF39Q8N4T4 335 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 KIAA1143Q96AT1 154 aaPredicted RBP25.67■■□□□ 1.7
SSU72-201ENST00000291386 SPNS1Q9H2V7 528 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 NT5DC2Q9H857 520 aa25.67■■□□□ 1.7
SSU72-201ENST00000291386 FOXO6A8MYZ6 492 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 C21orf140B9A014 251 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 DSCR3O14972 297 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 EFSO43281 561 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 CTIFO43310 598 aaKnown RBP25.66■■□□□ 1.7
SSU72-201ENST00000291386 SMIM24O75264 130 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 GLRA3O75311 464 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 AHRP35869 848 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 CASP2P42575 452 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 SCTRP47872 440 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 MEF2AQ02078 507 aaPredicted RBP25.66■■□□□ 1.7
SSU72-201ENST00000291386 TBCCQ15814 346 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 VASH2Q86V25 355 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 PTGR2Q8N8N7 351 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms