RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 UPK3BL1B0FP48 263 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 UPK3BL2E5RIL1 263 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 GNB5O14775 395 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 OR2B3O76000 313 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 SEMA3AQ14563 771 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 PCLAFQ15004 111 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 TCEA2Q15560 299 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 UAP1L1Q3KQV9 507 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ASB18Q6ZVZ8 466 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 ABHD11Q8NFV4 315 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 TNFAIP8L1Q8WVP5 186 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC38A3Q99624 504 aa11.07□□□□□ -0.64
NPC1L1-201ENST00000289547 H7C2Y5 167 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC5A2P31639 672 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 VIPR1P32241 457 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 KIR3DL1P43629 444 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 RTN4RL1Q86UN2 441 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 GKN2Q86XP6 184 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 GTPBP3Q969Y2 492 aaKnown RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF486Q96H40 463 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 PIGUQ9H490 435 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ANKHQ9HCJ1 492 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TAS2R9Q9NYW1 312 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CYP8B1Q9UNU6 501 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 RNF6Q9Y252 685 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM170BA6NMN3 283 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 PRKACGP22612 351 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 HLCSP50747 726 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 NUDT6P53370 316 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 PRKAG1P54619 331 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ARSFP54793 590 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF45Q02386 682 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CXorf57Q6NSI4 855 aaKnown RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CGB2Q6NT52 195 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 MSANTD2Q6P1R3 559 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ANKRD46Q86W74 232 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 IGDCC3Q8IVU1 814 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 SPAG16Q8N0X2 631 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 OR4K2Q8NGD2 314 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TEX47Q8TBZ9 253 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ZFP3Q96NJ6 502 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CCDC115Q96NT0 180 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 RTP3Q9BQQ7 232 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 SMURF2Q9HAU4 748 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 LRTM1Q9HBL6 345 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 C14orf119Q9NWQ9 140 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 MARCH5Q9NX47 278 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 FGF3P11487 239 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CXCL12P48061 93 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 SUOXP51687 545 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ATXN1P54253 815 aaKnown RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CDH12P55289 794 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TSC22D1Q15714 1073 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 KIAA0319Q5VV43 1072 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 STX12Q86Y82 276 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 GPR156Q8NFN8 814 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 OR10G6Q8NH81 332 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 APOLD1Q96LR9 279 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TEFMQ96QE5 360 aaKnown RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 SMOXQ9NWM0 555 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 OR14I1A6ND48 311 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 NPEPPSL1A6NEC2 478 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 PRMT5O14744 637 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 APOL3O95236 402 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 GSRP00390 522 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TFAP2AP05549 437 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 CD72P21854 359 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF33AQ06730 810 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 LAPTM5Q13571 262 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TAF1AQ15573 450 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TRIM40Q6P9F5 258 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 IGFN1Q86VF2 1251 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 BIRC7Q96CA5 298 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 FNDC11Q9BVV2 318 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 HCFC1R1Q9NWW0 138 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 OBP2AQ9NY56 170 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 AASSQ9UDR5 926 aa11.06□□□□□ -0.64
NPC1L1-201ENST00000289547 FADS2P1A8MWK0 482 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM47E-STBD1D6RA91 191 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 RFPL1O75677 317 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 IL7P13232 177 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 PPIBP23284 216 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 OPRL1P41146 370 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 RABL3Q5HYI8 236 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 LRRTM3Q86VH5 581 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 AKTIPQ9H8T0 292 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 TBC1D17Q9HA65 648 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 PAK1IP1Q9NWT1 392 aaPredicted RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 DLX3O60479 287 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 OR4F21O95013 312 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 MAGEA2P43356 314 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 RPS3AP61247 264 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC7A9P82251 487 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 RGS1Q08116 209 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms