RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CASP9P55211 416 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 PDSS1Q5T2R2 415 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TAC4Q86UU9 113 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ATG10Q9H0Y0 220 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 SMURF1Q9HCE7 757 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 CD93Q9NPY3 652 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 PRELID1Q9Y255 219 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 BORCS7-ASMTA0A0B4J1R7 106 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 SCDO00767 359 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 CAP1Q01518 475 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MFSD3Q96ES6 412 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 CMTM7Q96FZ5 175 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 OSER1Q9NX31 292 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 NLGN3Q9NZ94 848 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 PIK3C2AO00443 1686 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF142P52746 1687 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 H0YGN5 161 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TLL1O43897 1013 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 CXCL14O95715 111 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ALPPL2P10696 532 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 NDUFV1P49821 464 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MC1RQ01726 317 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ENDOVQ8N8Q3 282 aaKnown RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 OR6K2Q8NGY2 324 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 S100PBPQ96BU1 408 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 UBQLN2Q9UHD9 624 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 UBR2Q8IWV8 1755 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ZSCAN5BA6NJL1 495 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MANBAO00462 879 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 DFNA5O60443 496 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 FOXN2P32314 431 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MAD2L1BPQ15013 274 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ATP6AP1Q15904 470 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 LRIF1Q5T3J3 769 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 HAGHLQ6PII5 290 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM220Q6QAJ8 160 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 CIR1Q86X95 450 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 UBE2J2Q8N2K1 259 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM145Q8NBT3 493 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 RETREG1Q9H6L5 497 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 SDHAF3Q9NRP4 125 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MALT1Q9UDY8 824 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 FZD4Q9ULV1 537 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 A0A1W2PRB8 838 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 SLC33A1O00400 549 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 GNG2P59768 71 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 HERV-K104P61576 105 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 NADK2Q4G0N4 442 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 PRAMEF14Q5SWL7 426 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 PRAMEF13Q5VWM6 474 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TPGS2Q68CL5 300 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 FAM124AQ86V42 546 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 FAM46DQ8NEK8 389 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 OR52E4Q8NGH9 312 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TSPEARQ8WU66 669 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 B3GNT5Q9BYG0 378 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TBL1XR1Q9BZK7 514 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 OR2AG1Q9H205 316 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 POPDC3Q9HBV1 291 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 LOC100130705A0A1B0GUX0 176 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 KIAA1161Q6NSJ0 714 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 C1orf127Q8N9H9 656 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ASB12Q8WXK4 309 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ZUFSPQ96AP4 578 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 NUP98P52948 1817 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 A8MV72 311 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 IRF6O14896 467 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 RASAL1O95294 804 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 POU2F1P14859 743 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ENGP17813 658 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ENDOUP21128 410 aaKnown RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CTBP2P56545 445 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 E2F1Q01094 437 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC22A16Q86VW1 577 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 OR14C36Q8NHC7 312 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 PYURFQ96I23 114 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ERVK-11Q9UQG0 969 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ASB3Q9Y575 518 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 PCM1Q15154 2024 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 PHLPP1O60346 1717 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 M0R233 179 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 WNT9AO14904 365 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ERCC1P07992 297 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 HTR1AP08908 422 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 FAM163BP0C2L3 166 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ARFRP1Q13795 201 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 FRG2Q64ET8 278 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 REEP3Q6NUK4 255 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TIFABQ6ZNK6 161 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CCDC28AQ8IWP9 274 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ATP6V1C2Q8NEY4 427 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 HERVK_113Q902F9 699 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 BIRC8Q96P09 236 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 FRG2BQ96QU4 278 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CD180Q99467 661 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TM9SF2Q99805 663 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 LAMA4Q16363 1823 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 FECHP22830 423 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms