RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PRRC2CQ9Y520 2896 aaKnown RBP9.32□□□□□ -0.92
LRTM1-201ENST00000273286 SHANK1Q9Y566 2161 aa9.32□□□□□ -0.92
LRTM1-201ENST00000273286 TRBV5-4A0A0C4DH59 114 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 BTN3A1O00481 513 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 PEX12O00623 359 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 GPR42O15529 346 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ZNF749O43361 778 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SGTAO43765 313 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 KLHL18O94889 574 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 LCA5LO95447 670 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CAPN1P07384 714 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 RBP3P10745 1247 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SPTBP11277 2137 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ST6GAL1P15907 406 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 PTPN7P35236 360 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 NSG1P42857 185 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 MAGEA1P43355 309 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ZNF140P52738 457 aaPredicted RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 BOP1Q14137 746 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SPA17Q15506 151 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ZNF789Q5FWF6 425 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ANKRD20A2Q5SQ80 823 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ANKRD20A1Q5TYW2 823 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ANKRD20A3Q5VUR7 823 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 LYPLAL1Q5VWZ2 237 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 RHBDD2Q6NTF9 364 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SPESP1Q6UW49 350 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 IGFL3Q6UXB1 125 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 DAAM2Q86T65 1068 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CCDC170Q8IYT3 715 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 COG1Q8WTW3 980 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TFGQ92734 400 aaPredicted RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 KISS1RQ969F8 398 aaPredicted RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SPATA13Q96N96 652 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 NUDT9Q9BW91 350 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SPATA9Q9BWV2 254 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 OR6C2Q9NZP2 312 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 B3GNT3Q9Y2A9 372 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TRAF6Q9Y4K3 522 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TNRC6AQ8NDV7 1962 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 MACROD2A1Z1Q3 448 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TCP11X1B4DZS4 312 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 F5H423 210 aaPredicted RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 BTN3A3O00478 584 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ZNF185O15231 689 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 PJA2O43164 708 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 OR2B3O76000 313 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TJP3O95049 919 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 IPO7O95373 1038 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 FTH1P02794 183 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ACRV1P26436 265 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 PSMB4P28070 264 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 MC4RP32245 332 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CA5AP35218 305 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CYLC1P35663 651 aaPredicted RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 FOLR3P41439 243 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ARCN1P48444 511 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 LMAN1P49257 510 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SOX8P57073 446 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 DCDP81605 110 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 OTUD4Q01804 1114 aaKnown RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ATP1A4Q13733 1029 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ITIH4Q14624 930 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 PTPRCAPQ14761 206 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 P3H1Q32P28 736 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 FAM182AQ5T1J6 154 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TLDC1Q6P9B6 456 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CDHR3Q6ZTQ4 885 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 SPATC1Q76KD6 591 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 MRGPREQ86SM8 312 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 KLHDC8BQ8IXV7 354 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TBC1D21Q8IYX1 336 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ZBTB2Q8N680 514 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 STPG3Q8N7X2 389 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 OR13C4Q8NGS5 318 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ACTL9Q8TC94 416 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ZNF669Q96BR6 464 aaPredicted RBP9.31□□□□□ -0.92
LRTM1-201ENST00000273286 VPS50Q96JG6 964 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TTC1Q99614 292 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 TBL1YQ9BQ87 522 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CD244Q9BZW8 370 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 IGSF5Q9NSI5 407 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 NDOR1Q9UHB4 597 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 CREBBPQ92793 2442 aa9.31□□□□□ -0.92
LRTM1-201ENST00000273286 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 GOLGA6L9A6NEM1 432 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 ZSCAN9O15535 394 aaPredicted RBP9.3□□□□□ -0.92
LRTM1-201ENST00000273286 KCNN4O15554 427 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 PSMD3O43242 534 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 LDB2O43679 373 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 KLF7O75840 302 aaPredicted RBP9.3□□□□□ -0.92
LRTM1-201ENST00000273286 KNG1P01042 644 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 ENO2P09104 434 aaPredicted RBP9.3□□□□□ -0.92
LRTM1-201ENST00000273286 PIM1P11309 404 aaPredicted RBP9.3□□□□□ -0.92
LRTM1-201ENST00000273286 RWDD2BP57060 319 aa9.3□□□□□ -0.92
LRTM1-201ENST00000273286 EIF3EP60228 445 aaKnown RBP9.3□□□□□ -0.92
LRTM1-201ENST00000273286 CACNG1Q06432 222 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms