RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 MTFMTQ96DP5 389 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 PDXPQ96GD0 296 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 TOE1Q96GM8 510 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 DPY30Q9C005 99 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 PCED1AQ9H1Q7 454 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 CLMPQ9H6B4 373 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 GPR27Q9NS67 375 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 GEMIN8Q9NWZ8 242 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 STX18Q9P2W9 335 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 ADGRE2Q9UHX3 823 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 MOSPD1Q9UJG1 213 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 CYP8B1Q9UNU6 501 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 MAPRE3Q9UPY8 281 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 RUVBL1Q9Y265 456 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 TDRKHQ9Y2W6 561 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 DGKBQ9Y6T7 804 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 IGHV1OR15-9A0A0B4J2B8 117 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 ASPDHA6ND91 283 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 MAP3K13O43283 966 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 CXCR2P25025 360 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 PKLRP30613 574 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 SLBPQ14493 270 aaKnown RBP eCLIP14.79□□□□□ -0.04
COPS3-201ENST00000268717 CSRP2Q16527 193 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 DPY19L1Q2PZI1 675 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 TIGD2Q4W5G0 525 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 SPIN4Q56A73 249 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 PLA2G2CQ5R387 149 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 THEMIS2Q5TEJ8 643 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 MSANTD1Q6ZTZ1 278 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 C17orf64Q86WR6 236 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 FAM129CQ86XR2 697 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 KRT78Q8N1N4 520 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 ABHD11Q8NFV4 315 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 OR2L8Q8NGY9 312 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 STARD8Q92502 1023 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 TESCQ96BS2 214 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 LRRC58Q96CX6 371 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 ASB9Q96DX5 294 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 CAMK1GQ96NX5 476 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 IL17FQ96PD4 163 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 FERD3LQ96RJ6 166 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 C6orf106Q9H6K1 298 aaPredicted RBP14.79□□□□□ -0.04
COPS3-201ENST00000268717 KIR3DX1Q9H7L2 352 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 NT5DC2Q9H857 520 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 CD300AQ9UGN4 299 aa14.79□□□□□ -0.04
COPS3-201ENST00000268717 PIPSLA2A3N6 862 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 PDZK1P1A8MUH7 402 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 H0Y8X5 98 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 MTHFD1P11586 935 aaKnown RBP14.78□□□□□ -0.04
COPS3-201ENST00000268717 MPLP40238 635 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 HNRNPFP52597 415 aaKnown RBP14.78□□□□□ -0.04
COPS3-201ENST00000268717 RPL6Q02878 288 aaKnown RBP14.78□□□□□ -0.04
COPS3-201ENST00000268717 TRAP1Q12931 704 aaKnown RBP14.78□□□□□ -0.04
COPS3-201ENST00000268717 PTGR1Q14914 329 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 CLCA4Q14CN2 919 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 RPE65Q16518 533 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 CATSPEREQ5SY80 951 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 NOXRED1Q6NXP6 359 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 SUSD1Q6UWL2 747 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 SLC36A4Q6YBV0 504 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 HUS1BQ8NHY5 278 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 VPS33AQ96AX1 596 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 CCDC124Q96CT7 223 aaKnown RBP14.78□□□□□ -0.04
COPS3-201ENST00000268717 APIPQ96GX9 242 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 EBF2Q9HAK2 575 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 ADA2Q9NZK5 511 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 COLEC10Q9Y6Z7 277 aa14.78□□□□□ -0.04
COPS3-201ENST00000268717 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 A0A1W2PPV9 198 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 BCAS2O75934 225 aaPredicted RBP14.77□□□□□ -0.04
COPS3-201ENST00000268717 MYO1DO94832 1006 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 ZNF806P0C7X5 589 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 HSD17B1P14061 328 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 SDC1P18827 310 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 GCKP35557 465 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 DHPSP49366 369 aaPredicted RBP14.77□□□□□ -0.04
COPS3-201ENST00000268717 SRP54P61011 504 aaKnown RBP14.77□□□□□ -0.04
COPS3-201ENST00000268717 AP2B1P63010 937 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 ACSM2AQ08AH3 577 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 NFYCQ13952 458 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 CCNIQ14094 377 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 CCDC6Q16204 474 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 ACSM2BQ68CK6 577 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 GALNT18Q6P9A2 607 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 PRR23CQ6ZRP0 262 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 TMEFF1Q8IYR6 380 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 SLC13A3Q8WWT9 602 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 MTERF1Q99551 399 aaKnown RBP14.77□□□□□ -0.04
COPS3-201ENST00000268717 DMRT3Q9NQL9 472 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 IMP3Q9NV31 184 aaKnown RBP14.77□□□□□ -0.04
COPS3-201ENST00000268717 PLAGL1Q9UM63 463 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 SH2B3Q9UQQ2 575 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 CA5BQ9Y2D0 317 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 DLGAP4Q9Y2H0 992 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 PLEKHM1Q9Y4G2 1056 aa14.77□□□□□ -0.04
COPS3-201ENST00000268717 CFAP20Q9Y6A4 193 aaKnown RBP14.77□□□□□ -0.04
COPS3-201ENST00000268717 A0A1W2PPC4 97 aa14.77□□□□□ -0.05
COPS3-201ENST00000268717 MAGEB17A8MXT2 336 aa14.77□□□□□ -0.05
COPS3-201ENST00000268717 ACOT8O14734 319 aa14.77□□□□□ -0.05
COPS3-201ENST00000268717 FOXD2O60548 495 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms