RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 DZANK1Q9NVP4 752 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 MAN2B2Q9Y2E5 1009 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 DLGAP4Q9Y2H0 992 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 ZCWPW2A0A1B0GU75 182 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 UBE2QL1A1L167 161 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 FAM92AA1XBS5 289 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 ECDO95905 644 aaPredicted RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 GRK6P43250 576 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 ACADVLP49748 655 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 IQCCQ4KMZ1 466 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 UBAP2Q5T6F2 1119 aaKnown RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 SYVN1Q86TM6 617 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 OR10Q1Q8NGQ4 319 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 TSPEARQ8WU66 669 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 HERC2P3Q9BVR0 1158 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 ABCB9Q9NP78 766 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 MKL2Q9ULH7 1088 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 MYH7P12883 1935 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 KHDRBS3O75525 346 aaKnown RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 GPR68Q15743 365 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 IQCHQ86VS3 1027 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 TFECO14948 347 aaPredicted RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 TGM5O43548 720 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 FDXRP22570 491 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 PTGR1Q14914 329 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 SLC30A6Q6NXT4 461 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 NCEH1Q6PIU2 408 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 NFKBIDQ8NI38 313 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 RAB2BQ8WUD1 216 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 BADQ92934 168 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 TMEM138Q9NPI0 162 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 SSNA1O43805 119 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 MEF2AQ02078 507 aaPredicted RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 ZNF763Q0D2J5 394 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 GRB7Q14451 532 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 PYURFQ96I23 114 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 TAPBPLQ9BX59 468 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 CLEC4AQ9UMR7 237 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 ZNF99A8MXY4 864 aaPredicted RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 H7C0S8 307 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 GNB5O14775 395 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 PLOD3O60568 738 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 ZNF648Q5T619 568 aaPredicted RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 ANKRD26P1Q6NSI1 321 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 ENDOVQ8N8Q3 282 aaKnown RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 TMEM174Q8WUU8 243 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 FCGR1BQ92637 280 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 RPRD1BQ9NQG5 326 aaKnown RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 TTC34A8MYJ7 566 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 C6orf47O95873 294 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 AGR2O95994 175 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 H1F0P07305 194 aaKnown RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 GNSP15586 552 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 ELAVL3Q14576 367 aaKnown RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 PCBP2Q15366 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDH3-201ENST00000264012 SPATS1Q496A3 300 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 ATG14Q6ZNE5 492 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 OR10H4Q8NGA5 316 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 IPCEF1Q8WWN9 437 aaPredicted RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 RAB7BQ96AH8 199 aa13.57□□□□□ -0.24
CDH3-201ENST00000264012 RPL36Q9Y3U8 105 aaKnown RBP13.57□□□□□ -0.24
CDH3-201ENST00000264012 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 CHRM5P08912 532 aaPredicted RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 SDC2P34741 201 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 SEPHS1P49903 392 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 XKP51811 444 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 ZNF630Q2M218 657 aaPredicted RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 OGFOD2Q6N063 350 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 NANOGP8Q6NSW7 305 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 NOXRED1Q6NXP6 359 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 FRRS1Q6ZNA5 592 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 RNASE11Q8TAA1 199 aaKnown RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 HSH2DQ96JZ2 352 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 KCNC2Q96PR1 638 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 NANOGQ9H9S0 305 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 ACSL5Q9ULC5 683 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 H7BY64 318 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 RSL1D1O76021 490 aaKnown RBP13.56□□□□□ -0.24
CDH3-201ENST00000264012 DIRAS1O95057 198 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 MXD1Q05195 221 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 DHCR24Q15392 516 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 KLHL22Q53GT1 634 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 OR4K1Q8NGD4 311 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 PRAP1Q96NZ9 151 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 SLC2A11Q9BYW1 496 aa13.56□□□□□ -0.24
CDH3-201ENST00000264012 MAFFQ9ULX9 164 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms