RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CD47Q08722 323 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 GRIK2Q13002 908 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 FBXL22Q6P050 247 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 KIAA1958Q8N8K9 716 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 UFD1Q92890 307 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 FBXO32Q969P5 355 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 TM6SF2Q9BZW4 377 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 RERGLQ9H628 205 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 NIPAL2Q9H841 368 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
SCARF1-201ENST00000263071 ABCC13Q9NSE7 274 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 USE1Q9NZ43 259 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 FKBPLQ9UIM3 349 aa13.77□□□□□ -0.21
SCARF1-201ENST00000263071 RPH3AQ9Y2J0 694 aaPredicted RBP13.77□□□□□ -0.21
SCARF1-201ENST00000263071 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 NBNO60934 754 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 ZNF37AP17032 561 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 AQP1P29972 269 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 HSPA7P48741 367 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 CPT1AP50416 773 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 KCNQ1P51787 676 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 FAM189BP81408 668 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 COL9A2Q14055 689 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 STAG3L4Q8TBR4 150 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 FAM129BQ96TA1 746 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 RHNO1Q9BSD3 238 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 RACGAP1Q9H0H5 632 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 SH3D21A4FU49 640 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 MITFO75030 526 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 DNAJB1P25685 340 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 RPS24P62847 133 aaKnown RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 FLI1Q01543 452 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 CPSF6Q16630 551 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 ERICH5Q6P6B1 374 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 PLEKHH3Q7Z736 793 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 GPSM1Q86YR5 675 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 ULK4Q96C45 1275 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 MYEOVQ96EZ4 313 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 MYRFLQ96LU7 910 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 HOPXQ9BPY8 73 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-201ENST00000263071 SCNN1AP37088 669 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 LCP2Q13094 533 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 DAG1Q14118 895 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 CYP27C1Q4G0S4 372 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 TIGD4Q8IY51 512 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 OR2T11Q8NH01 316 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 BCL2L14Q9BZR8 327 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 SMOC2Q9H3U7 446 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 ERVK-18Q9QC07 812 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 PKP3Q9Y446 797 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 SESN1Q9Y6P5 492 aa13.76□□□□□ -0.21
SCARF1-201ENST00000263071 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 G3V2T6 193 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 ECDO95905 644 aaPredicted RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 C1QBP02746 253 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 GPIP06744 558 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 KCNE1P15382 129 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 NUP62P37198 522 aaPredicted RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 HOXA1P49639 335 aaPredicted RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 BAMBIQ13145 260 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 QPRTQ15274 297 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 FSCN1Q16658 493 aaKnown RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 FAM174BQ3ZCQ3 159 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 SCD5Q86SK9 330 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 PGBD5Q8N414 524 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 KRTCAP2Q8N6L1 136 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 PTP4A1Q93096 173 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 ZYG11BQ9C0D3 744 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 SDHAF3Q9NRP4 125 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 DNAJC11Q9NVH1 559 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 INTS6Q9UL03 887 aaKnown RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 GABRDO14764 452 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 SERPINF2P08697 491 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 CSKP41240 450 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 PSMD8P48556 350 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 SCAPQ12770 1279 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 KLHL17Q6TDP4 642 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 MBOAT1Q6ZNC8 495 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 DTWD1Q8N5C7 304 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 ARL6IP6Q8N6S5 226 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 ZNF680Q8NEM1 530 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 CLEC4MQ9H2X3 399 aaPredicted RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 MARCH2Q9P0N8 246 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 GTF2IRD1Q9UHL9 959 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 ACSL5Q9ULC5 683 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 LYVE1Q9Y5Y7 322 aa13.75□□□□□ -0.21
SCARF1-201ENST00000263071 ZFC3H1O60293 1989 aaKnown RBP13.75□□□□□ -0.21
SCARF1-201ENST00000263071 SEC22BO75396 215 aa13.74□□□□□ -0.21
SCARF1-201ENST00000263071 SNX4O95219 450 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms