RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ELAC2Q9BQ52 826 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 KAT8Q9H7Z6 458 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 POPDC3Q9HBV1 291 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PPANQ9NQ55 473 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 AIG1Q9NVV5 245 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 TCRBV3S1A0A5B6 114 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 DFNA5O60443 496 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 DNAJC8O75937 253 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC25A14O95258 325 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ATP1B2P14415 290 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 STMN1P16949 149 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 OGNP20774 298 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ETV5P41161 510 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ST13P50502 369 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF136P52737 540 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CSE1LP55060 971 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CDSNQ15517 529 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 TSNAXIP1Q2TAA8 658 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 SFT2D3Q587I9 215 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 C18orf63Q68DL7 685 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PIP4P1Q86T03 277 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 NR2C2APQ86WQ0 139 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PTRH1Q86Y79 214 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 SLITRK4Q8IW52 837 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC35F3Q8IY50 421 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 OR5K2Q8NHB8 316 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC37A2Q8TED4 501 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 KLHL8Q9P2G9 620 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 KCND3Q9UK17 655 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ING1Q9UK53 422 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ATG4BQ9Y4P1 393 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 LRIT2A6NDA9 550 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 GSTM1P09488 218 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 NNMTP40261 264 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RAP1GDS1P52306 607 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 GSTM4Q03013 218 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 ACTN3Q08043 901 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 TRIM61Q5EBN2 209 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 ATP6V0D2Q8N8Y2 350 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF441Q8N8Z8 693 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 OR7A2PQ8NGA2 310 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 AGR3Q8TD06 166 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RHBGQ9H310 441 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 SEPT3Q9UH03 358 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PMF1-BGLAPU3KQ54 211 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 A0A1W2PPC4 97 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 TMEM247A6NEH6 219 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 INPP4BO15327 924 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 KCNK5O95279 499 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 ST6GAL1P15907 406 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC1A6P48664 564 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 AP1S1P61966 158 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RAD51Q06609 339 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC12A1Q13621 1099 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PRTGQ2VWP7 1150 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 NHSL2Q5HYW2 709 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CDKL3Q8IVW4 592 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PHACTR4Q8IZ21 702 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 C2orf73Q8N5S3 287 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CDK5RAP1Q96SZ6 601 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CYTH2Q99418 400 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CDCA3Q99618 268 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 SOX17Q9H6I2 414 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PCDHB14Q9Y5E9 798 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 A0A1W2PQU0 124 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 SHISA3A0PJX4 238 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 H0YIV9 168 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 LPOP22079 712 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 MAT2AP31153 395 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 GRK5P34947 590 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RPS9P46781 194 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 OXCT1P55809 520 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 HBA1P69905 142 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 GPR18Q14330 331 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 DUSP7Q16829 419 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PRPF38BQ5VTL8 546 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 TTC39BQ5VTQ0 682 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 IYDQ6PHW0 289 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC2A7Q6PXP3 512 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RAPH1Q70E73 1250 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CYP4Z1Q86W10 505 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM76AQ8TAV0 307 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PIWIL2Q8TC59 973 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM3CQ92520 227 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 OTUB2Q96DC9 234 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CAPS2Q9BXY5 557 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM126AQ9BYI3 521 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CD244Q9BZW8 370 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 INTS10Q9NVR2 710 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 NDE1Q9NXR1 346 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 BIRC5O15392 142 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RNASEH1O60930 286 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 KLF8O95600 359 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 UMODP07911 640 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 HOXC4P09017 264 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 PKMP14618 531 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 EFNA1P20827 205 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 CTSKP43235 329 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 KCNAB1Q14722 419 aa5.36□□□□□ -1.55
TOPBP1-201ENST00000260810 RBBP5Q15291 538 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms