RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TPT1P8Q9HAU6 139 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 PCDH12Q9NPG4 1184 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ACOT13Q9NPJ3 140 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 SPATA6Q9NWH7 488 aaPredicted RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 SIRT5Q9NXA8 310 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 THUMPD1Q9NXG2 353 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 KIF17Q9P2E2 1029 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 RUVBL1Q9Y265 456 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 PCDHB11Q9Y5F2 797 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 FAM20BO75063 409 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 PARNO95453 639 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 NADKO95544 446 aaPredicted RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 POP4O95707 220 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 FADS2O95864 444 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 CXCL10P02778 98 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 HLA-FP30511 346 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ITGA1P56199 1179 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 RPP38P78345 283 aaKnown RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 NPRL3Q12980 569 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 DGCR6Q14129 220 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 OXA1LQ15070 435 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 DGUOKQ16854 277 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 FAHD1Q6P587 224 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 NEK10Q6ZWH5 1172 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 SVOPQ8N4V2 548 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 CDC26Q8NHZ8 85 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ELMO1Q92556 727 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 C11orf24Q96F05 449 aaPredicted RBP14.74□□□□□ -0.05
DDX56-201ENST00000258772 C7orf34Q96L11 122 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 ALPK1Q96QP1 1244 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 MROQ9BYG7 248 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 CCNB1IP1Q9NPC3 277 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 RASSF1Q9NS23 344 aa14.74□□□□□ -0.05
DDX56-201ENST00000258772 MRPS14O60783 128 aaKnown RBP14.73□□□□□ -0.05
DDX56-201ENST00000258772 SERPINB7O75635 380 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 EFNA1P20827 205 aaPredicted RBP14.73□□□□□ -0.05
DDX56-201ENST00000258772 ALDH4A1P30038 563 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 HPCAL1P37235 193 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 C21orf58P58505 322 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 SLC7A9P82251 487 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 MVKQ03426 396 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 ACSM2AQ08AH3 577 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 CBX3Q13185 183 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 DDX39BQ13838 428 aaKnown RBP14.73□□□□□ -0.05
DDX56-201ENST00000258772 KCNC3Q14003 757 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 PROX2Q3B8N5 592 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 ACSM2BQ68CK6 577 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 PRSS48Q7RTY5 328 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 THOC6Q86W42 341 aaKnown RBP14.73□□□□□ -0.05
DDX56-201ENST00000258772 RASGRP3Q8IV61 690 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 KLHL23Q8NBE8 558 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 MRPS31Q92665 395 aaKnown RBP14.73□□□□□ -0.05
DDX56-201ENST00000258772 SH3KBP1Q96B97 665 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 TPD52L3Q96J77 140 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 DUSP26Q9BV47 211 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 ALOXE3Q9BYJ1 711 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 DAPK2Q9UIK4 370 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 FZD4Q9ULV1 537 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 PMF1-BGLAPU3KQ54 211 aa14.73□□□□□ -0.05
DDX56-201ENST00000258772 CXorf51AA0A1B0GTR3 108 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 E9PQ18 207 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 SGTAO43765 313 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 WBP4O75554 376 aaKnown RBP14.72□□□□□ -0.05
DDX56-201ENST00000258772 NUDT7P0C024 238 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 KRT20P35900 424 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 DOC2AQ14183 400 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 PAGE2BQ5JRK9 111 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 TRIM74Q86UV6 250 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 TRIM73Q86UV7 250 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 SLC39A11Q8N1S5 342 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
DDX56-201ENST00000258772 DYNC2LI1Q8TCX1 351 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 ASZ1Q8WWH4 475 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 SCAMP4Q969E2 229 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 PITX2Q99697 317 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 HERC2P3Q9BVR0 1158 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 FBXO8Q9NRD0 319 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 TRNAU1APQ9NX07 287 aaKnown RBP14.72□□□□□ -0.05
DDX56-201ENST00000258772 SLCO3A1Q9UIG8 710 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 GABRR3A8MPY1 467 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 E7EQ34 232 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 PCDHGA12O60330 932 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 DPM1O60762 260 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 PQBP1O60828 265 aaKnown RBP14.72□□□□□ -0.05
DDX56-201ENST00000258772 C9P02748 559 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 URODP06132 367 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 SERPINB10P48595 397 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 CRYBA2P53672 197 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 NCS1P62166 190 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 CREMQ03060 361 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 HS6ST3Q8IZP7 471 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 CHST14Q8NCH0 376 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 IPCEF1Q8WWN9 437 aaPredicted RBP14.72□□□□□ -0.05
DDX56-201ENST00000258772 SIGLEC11Q96RL6 698 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 CHST8Q9H2A9 424 aa14.72□□□□□ -0.05
DDX56-201ENST00000258772 SCAMP2O15127 329 aaKnown RBP14.71□□□□□ -0.05
DDX56-201ENST00000258772 MYO1DO94832 1006 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 SLCO2B1O94956 709 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 KCNJ10P78508 379 aa14.71□□□□□ -0.05
DDX56-201ENST00000258772 CAMK2GQ13555 558 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms