RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ACRV1P26436 265 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 GRK5P34947 590 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 CTSKP43235 329 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 RGS4P49798 205 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 CHRNA6Q15825 494 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 OR6F1Q8NGZ6 308 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 DNASE1L2Q92874 299 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 TM9SF3Q9HD45 589 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 PDP1Q9P0J1 537 aaPredicted RBP18.34■□□□□ 0.53
SNX4-201ENST00000251775 DGKAP23743 735 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 ARHGDIAP52565 204 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 EPHB3P54753 998 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 HMGCS1Q01581 520 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 GPRC6AQ5T6X5 926 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 FAM217AQ8IXS0 508 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 AMER2Q8N7J2 671 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 CLHC1Q8NHS4 586 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 EGFL8Q99944 293 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 CFHR5Q9BXR6 569 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 MARCH7Q9H992 704 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 IL1RAPQ9NPH3 570 aa18.34■□□□□ 0.53
SNX4-201ENST00000251775 FARSBQ9NSD9 589 aaKnown RBP18.34■□□□□ 0.53
SNX4-201ENST00000251775 A0A096LPI6 279 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 GLYATL1P3A0A0U1RQE8 302 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.33■□□□□ 0.53
SNX4-201ENST00000251775 FFAR3O14843 346 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 GPR42O15529 346 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 ZNF821O75541 412 aaPredicted RBP18.33■□□□□ 0.53
SNX4-201ENST00000251775 ZNF682O95780 498 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 C21orf33P30042 268 aaPredicted RBP18.33■□□□□ 0.53
SNX4-201ENST00000251775 TSPAN33Q86UF1 283 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 SLC39A11Q8N1S5 342 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 ZBTB2Q8N680 514 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 TMEM169Q96HH4 297 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 RNF167Q9H6Y7 350 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 SERHLQ9NQF3 203 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 CRLS1Q9UJA2 301 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 PCDHGB6Q9Y5F9 930 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 DENND4CQ5VZ89 1909 aa18.33■□□□□ 0.53
SNX4-201ENST00000251775 RGS14O43566 566 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 DNAJA1P31689 397 aaKnown RBP18.33■□□□□ 0.52
SNX4-201ENST00000251775 S100A5P33763 92 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 CYP4F8P98187 520 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 LMAN2Q12907 356 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 SOWAHCQ53LP3 525 aaPredicted RBP18.33■□□□□ 0.52
SNX4-201ENST00000251775 ZNF551Q7Z340 670 aaPredicted RBP18.33■□□□□ 0.52
SNX4-201ENST00000251775 ENTHD1Q8IYW4 607 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 FCGR1BQ92637 280 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 PITX2Q99697 317 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 CD244Q9BZW8 370 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 ZNF221Q9UK13 617 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 PCDHGA3Q9Y5H0 932 aa18.33■□□□□ 0.52
SNX4-201ENST00000251775 CENPBD1B2RD01 187 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 hCG_2039718K7EN88 272 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 SCO2O43819 266 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 ERN1O75460 977 aaKnown RBP18.32■□□□□ 0.52
SNX4-201ENST00000251775 FPR1P21462 350 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 KRR1Q13601 381 aaKnown RBP18.32■□□□□ 0.52
SNX4-201ENST00000251775 TIGD6Q17RP2 521 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 DGKKQ5KSL6 1271 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 ATAD3CQ5T2N8 411 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 LRIF1Q5T3J3 769 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 TCEAL8Q8IYN2 117 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 ADGRG2Q8IZP9 1017 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 POP5Q969H6 163 aaKnown RBP18.32■□□□□ 0.52
SNX4-201ENST00000251775 VOPP1Q96AW1 172 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 DHRS1Q96LJ7 313 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 INPP5KQ9BT40 448 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 COPS4Q9BT78 406 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 KRT84Q9NSB2 600 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 SIRT5Q9NXA8 310 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 WWOXQ9NZC7 414 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 TBC1D14Q9P2M4 693 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 SAMD4AQ9UPU9 718 aaKnown RBP18.32■□□□□ 0.52
SNX4-201ENST00000251775 PLXNB3Q9ULL4 1909 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 CD70P32970 193 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 RPP38P78345 283 aaKnown RBP18.32■□□□□ 0.52
SNX4-201ENST00000251775 MAD2L1Q13257 205 aaPredicted RBP18.32■□□□□ 0.52
SNX4-201ENST00000251775 TPGS1Q6ZTW0 290 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 SLC46A3Q7Z3Q1 461 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 BBS7Q8IWZ6 715 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 ZNF558Q96NG5 402 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 CEP44Q9C0F1 390 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 ANGPTL3Q9Y5C1 460 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 KIAA1671Q9BY89 1806 aa18.32■□□□□ 0.52
SNX4-201ENST00000251775 E9PQ18 207 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 TPD52L2O43399 206 aaKnown RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 B3GALT4O96024 378 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 GNRH1P01148 92 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 HOXB9P17482 250 aaPredicted RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 PTPN6P29350 595 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 CACHD1Q5VU97 1274 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 MACC1Q6ZN28 852 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 MBOAT1Q6ZNC8 495 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 GPR26Q8NDV2 337 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 REXO4Q9GZR2 422 aaKnown RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 KCNH6Q9H252 994 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 NPAP1Q9NZP6 1156 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 CCDC59Q9P031 241 aaKnown RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 SNX6Q9UNH7 406 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms