RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LEFTY1O75610 366 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 SLC16A8O95907 504 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 ARHGDIAP52565 204 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 GAB1Q13480 694 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.69■■□□□ 1.54
RAB40C-201ENST00000248139 WDR20Q8TBZ3 569 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 RORBQ92753 470 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 GLMNQ92990 594 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 TMEM184CQ9NVA4 438 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 SH3BP4Q9P0V3 963 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 RAPGEFL1Q9UHV5 662 aa24.69■■□□□ 1.54
RAB40C-201ENST00000248139 DNAH14Q0VDD8 3507 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 TTC34A8MYJ7 566 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 ARHGEF15O94989 841 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 C8AP07357 584 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 CCDC159P0C7I6 412 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 ITGAMP11215 1152 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 PRPH2P23942 346 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 TOP3AQ13472 1001 aaPredicted RBP24.68■■□□□ 1.54
RAB40C-201ENST00000248139 AGTRAPQ6RW13 159 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 ZNF852Q6ZMS4 543 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 SLCO6A1Q86UG4 719 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 OR4K1Q8NGD4 311 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 KRT84Q9NSB2 600 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 THUMPD1Q9NXG2 353 aaKnown RBP24.68■■□□□ 1.54
RAB40C-201ENST00000248139 ITM2BQ9Y287 266 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 COQ6Q9Y2Z9 468 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 ZBBXA8MT70 800 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 GPX2P18283 190 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 PTPN5P54829 565 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 NCS1P62166 190 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 RAE1P78406 368 aaKnown RBP24.68■■□□□ 1.54
RAB40C-201ENST00000248139 CYP2A13Q16696 494 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 PERM1Q5SV97 790 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 PLEKHS1Q5SXH7 462 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 IER5LQ5T953 404 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 DUSP26Q9BV47 211 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 TMEM121BQ9BXQ6 578 aaPredicted RBP24.68■■□□□ 1.54
RAB40C-201ENST00000248139 PNMA8BQ9ULN7 279 aaPredicted RBP24.68■■□□□ 1.54
RAB40C-201ENST00000248139 NAALAD2Q9Y3Q0 740 aa24.68■■□□□ 1.54
RAB40C-201ENST00000248139 VIPP01282 170 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 MPC1LP0DKB6 136 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 DNAJA1P31689 397 aaKnown RBP24.67■■□□□ 1.54
RAB40C-201ENST00000248139 SLC35A2P78381 396 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 CREMQ03060 361 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 CDKL4Q5MAI5 379 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 GPR153Q6NV75 609 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 ANKRD13BQ86YJ7 626 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 SLAIN1Q8ND83 568 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 ZFP90Q8TF47 636 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 ASZ1Q8WWH4 475 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 SH3YL1Q96HL8 342 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-201ENST00000248139 HCFC2Q9Y5Z7 792 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 GRM6O15303 877 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 UGT2B11O75310 529 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 ANXA4P09525 319 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-201ENST00000248139 IL1RNP18510 177 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 TRPC1P48995 793 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 RFX4Q33E94 735 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 EGFLAMQ63HQ2 1017 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 FAM180BQ6P0A1 224 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 NAGSQ8N159 534 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 FBLIM1Q8WUP2 373 aa24.67■■□□□ 1.54
RAB40C-201ENST00000248139 TRUB1Q8WWH5 349 aaKnown RBP24.67■■□□□ 1.54
RAB40C-201ENST00000248139 STOX2Q9P2F5 926 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-201ENST00000248139 SRSF11Q05519 484 aaKnown RBP24.66■■□□□ 1.54
RAB40C-201ENST00000248139 DDX53Q86TM3 631 aaKnown RBP24.66■■□□□ 1.54
RAB40C-201ENST00000248139 TRIM74Q86UV6 250 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 RASGEF1AQ8N9B8 481 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 OR52J3Q8NH60 311 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 KCNC2Q96PR1 638 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 C19orf43Q9BQ61 176 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 KLHL42Q9P2K6 505 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 PCDH7O60245 1069 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 FAM20BO75063 409 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 LCKP06239 509 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 PABPC1P11940 636 aaKnown RBP24.66■■□□□ 1.54
RAB40C-201ENST00000248139 FPR1P21462 350 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 OR1E2P47887 323 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 SYTL3Q4VX76 610 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 ZC3H12BQ5HYM0 836 aaKnown RBP24.66■■□□□ 1.54
RAB40C-201ENST00000248139 AHSA2Q719I0 299 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 OTOP2Q7RTS6 562 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 CPEB1Q9BZB8 566 aaKnown RBP24.66■■□□□ 1.54
RAB40C-201ENST00000248139 TESMINQ9Y4I5 508 aa24.66■■□□□ 1.54
RAB40C-201ENST00000248139 GNG14A0A1W2PPG7 69 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 PCDHGA12O60330 932 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 KRT20P35900 424 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 AP1S2P56377 157 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 RPP38P78345 283 aaKnown RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 CAPN13Q6MZZ7 669 aaPredicted RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 CBLL1Q75N03 491 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 RAVER1Q8IY67 606 aaKnown RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 HUS1BQ8NHY5 278 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 ZNF689Q96CS4 500 aaPredicted RBP24.65■■□□□ 1.54
RAB40C-201ENST00000248139 REEP1Q9H902 201 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 SELENONQ9NZV5 590 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 SH2B3Q9UQQ2 575 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 SEMG1P04279 462 aa24.65■■□□□ 1.54
RAB40C-201ENST00000248139 FUT4P22083 530 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms