RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CELF5Q8N6W0 485 aaKnown RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 NETO1Q8TDF5 533 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 BRF2Q9HAW0 419 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 RUVBL1Q9Y265 456 aaKnown RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 ITM2BQ9Y287 266 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 ORC6Q9Y5N6 252 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 SNX5Q9Y5X3 404 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 ZNF182P17025 639 aaPredicted RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 BDKRB1P46663 353 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 WNT3P56703 355 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 SPIDRQ14159 915 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 ZC3H12BQ5HYM0 836 aaKnown RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 C16orf87Q6PH81 154 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 XKR5Q6UX68 686 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 SERPINA11Q86U17 422 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 HIPK1Q86Z02 1210 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 ZNF366Q8N895 744 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 TANKQ92844 425 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 PKP4Q99569 1192 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 EBPLQ9BY08 206 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 REXO4Q9GZR2 422 aaKnown RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 SMURF2Q9HAU4 748 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 B3GNT3Q9Y2A9 372 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 TLL1O43897 1013 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 CLPXO76031 633 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 SERPINA1P01009 418 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 IL7RP16871 459 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 RAD23AP54725 363 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 BCL7AQ4VC05 210 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 TMEM240Q5SV17 173 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 TMEM220Q6QAJ8 160 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 GPR155Q7Z3F1 870 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 RBM12BQ8IXT5 1001 aaKnown RBP21.18■□□□□ 0.98
RNF39-201ENST00000244360 FBXO15Q8NCQ5 510 aaPredicted RBP21.18■□□□□ 0.98
RNF39-201ENST00000244360 OR8J2Q8NGG1 315 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 FOXJ1Q92949 421 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 ITFG2Q969R8 447 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 AMBRA1Q9C0C7 1298 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 RAD21L1Q9H4I0 556 aa21.18■□□□□ 0.98
RNF39-201ENST00000244360 SLC16A8O95907 504 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 SOD1P00441 154 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 IMPDH2P12268 514 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 PLA2G16P53816 162 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 ST8SIA6P61647 398 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 KCNAB2Q13303 367 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 SLC14A1Q13336 389 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 ANKDD1AQ495B1 522 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 DOK6Q6PKX4 331 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 SPESP1Q6UW49 350 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 PGBD3Q8N328 593 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 BPIFB6Q8NFQ5 453 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 VN1R2Q8NFZ6 395 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 OR7A2PQ8NGA2 310 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 FAM120CQ9NX05 1096 aaKnown RBP21.17■□□□□ 0.98
RNF39-201ENST00000244360 GULP1Q9UBP9 304 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 NAALAD2Q9Y3Q0 740 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 FOXD2O60548 495 aaPredicted RBP21.17■□□□□ 0.98
RNF39-201ENST00000244360 ADH1CP00326 375 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 MYCLP1P12525 358 aaPredicted RBP21.17■□□□□ 0.98
RNF39-201ENST00000244360 MAGEA2P43356 314 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 BMXP51813 675 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 IST1P53990 364 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 ZNF697Q5TEC3 545 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 ETFBKMTQ8IXQ9 262 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 MUL1Q969V5 352 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 RSPRY1Q96DX4 576 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 MED8Q96G25 268 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 PYURFQ96I23 114 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 MTERF1Q99551 399 aaKnown RBP21.17■□□□□ 0.98
RNF39-201ENST00000244360 BCL7BQ9BQE9 202 aa21.17■□□□□ 0.98
RNF39-201ENST00000244360 MRPS23Q9Y3D9 190 aaKnown RBP21.17■□□□□ 0.98
RNF39-201ENST00000244360 LOC100130705A0A1B0GUX0 176 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 KPNA3O00505 521 aaPredicted RBP21.16■□□□□ 0.98
RNF39-201ENST00000244360 SLC16A6O15403 523 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 ZBTB11O95625 1053 aaPredicted RBP21.16■□□□□ 0.98
RNF39-201ENST00000244360 PRNPP04156 253 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 ITIH1P19827 911 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 RYKP34925 604 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 DCTP40126 519 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 FPGSQ05932 587 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 ZNF691Q5VV52 312 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 FBXO46Q6PJ61 603 aaPredicted RBP21.16■□□□□ 0.98
RNF39-201ENST00000244360 ZNF765Q7L2R6 523 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 STARD8Q92502 1023 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 ZNF566Q969W8 418 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 FOPNLQ96NB1 174 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 WRAP53Q9BUR4 548 aaKnown RBP21.16■□□□□ 0.98
RNF39-201ENST00000244360 HS6ST1O60243 411 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 LILRB5O75023 590 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 E2F6O75461 281 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 CCNDBP1O95273 360 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 CCDC159P0C7I6 412 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 PDHA2P29803 388 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 CD47Q08722 323 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 ACSM2AQ08AH3 577 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 ACSM2BQ68CK6 577 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 SNRNP27Q8WVK2 155 aaKnown RBP21.16■□□□□ 0.98
RNF39-201ENST00000244360 TBC1D20Q96BZ9 403 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 SGK2Q9HBY8 427 aa21.16■□□□□ 0.98
RNF39-201ENST00000244360 RWDD3Q9Y3V2 267 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms