RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PRKAR1AP10644 381 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 MEF2AQ02078 507 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-201ENST00000230480 HYAL2Q12891 473 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 SLC9A5Q14940 896 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 NKAIN1Q4KMZ8 207 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 CYB5D1Q6P9G0 228 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 TTLL10Q6ZVT0 673 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 THOC6Q86W42 341 aaKnown RBP13.09□□□□□ -0.31
VEGFA-201ENST00000230480 RAB42Q8N4Z0 105 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 MED8Q96G25 268 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 FANCEQ9HB96 536 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 TCFL5Q9UL49 500 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 VSTM2BA6NLU5 285 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ZNF839A8K0R7 811 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-201ENST00000230480 C4orf51C9J302 202 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 K7EM74 188 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 MASP2O00187 686 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 KATNA1O75449 491 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 RFPL1O75677 317 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 CD22P20273 847 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 SLC26A3P40879 764 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 OR1D4P47884 311 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ATP6V0D1P61421 351 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 RHDQ02161 417 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 E2F2Q14209 437 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 LY6DQ14210 128 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ERV3-1Q14264 604 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 SLC29A2Q14542 456 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 NCF4Q15080 339 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 CAPN13Q6MZZ7 669 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-201ENST00000230480 SLCO4C1Q6ZQN7 724 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 SH2D5Q6ZV89 423 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 PRSS41Q7RTY9 318 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 GPR135Q8IZ08 494 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 METTL27Q8N6F8 245 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-201ENST00000230480 AMER3Q8N944 861 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ANKRD53Q8N9V6 530 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ALKBH8Q96BT7 664 aaKnown RBP13.08□□□□□ -0.32
VEGFA-201ENST00000230480 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 SPSB2Q99619 263 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 GPR87Q9BY21 358 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ALG9Q9H6U8 611 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 ZNF180Q9UJW8 692 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-201ENST00000230480 NBASA2RRP1 2371 aa13.08□□□□□ -0.32
VEGFA-201ENST00000230480 HELZ2Q9BYK8 2649 aaKnown RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 IGLV3-12A0A075B6K2 115 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 A0A096LPK6 155 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 A0A1B0GX78 115 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 LRRC14BA6NHZ5 514 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 FFAR3O14843 346 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 GPR42O15529 346 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 KLK8O60259 260 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 SHBGP04278 402 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 ITGB2P05107 769 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 KLK3P07288 261 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 LTA4HP09960 611 aaKnown RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 HIST1H2AGP0C0S8 130 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 TFEBP19484 476 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 HIST1H2ADP20671 130 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 VARSP26640 1264 aaKnown RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 CRABP2P29373 138 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 AGTR2P50052 363 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 PMS2P54278 862 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 EMP3P54852 163 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 VSNL1P62760 191 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 ILF2Q12905 390 aaKnown RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 GRM7Q14831 915 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 SLMAPQ14BN4 828 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 UGT8Q16880 541 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 TCTE1Q5JU00 501 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 THEMIS2Q5TEJ8 643 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 FAM219BQ5XKK7 198 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 ADNP2Q6IQ32 1131 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 C16orf46Q6P387 395 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 ADGRD1Q6QNK2 874 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 TRMT10CQ7L0Y3 403 aaKnown RBP13.07□□□□□ -0.32
VEGFA-201ENST00000230480 OVCH1Q7RTY7 1134 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 VN1R5Q7Z5H4 357 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 ADAMTSL2Q86TH1 951 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 C17orf64Q86WR6 236 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 PDSS2Q86YH6 399 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 CSNK1A1LQ8N752 337 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 MFSD9Q8NBP5 474 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 KCT2Q8NC54 265 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 PDPRQ8NCN5 879 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 PROKR1Q8TCW9 393 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 WBP1Q96G27 269 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 HIST1H2AHQ96KK5 128 aa13.07□□□□□ -0.32
VEGFA-201ENST00000230480 HIST1H2AJQ99878 128 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms