RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 INSIG1O15503 277 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 UROSP10746 265 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TTPAP49638 278 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ELP6Q0PNE2 266 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TYSND1Q2T9J0 566 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 RFX4Q33E94 735 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 BCL7AQ4VC05 210 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MS4A13Q5J8X5 152 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 SLC8B1Q6J4K2 584 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ZNF621Q6ZSS3 439 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 PARP16Q8N5Y8 322 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MMP27Q9H306 513 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ABCB9Q9NP78 766 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 PTPRFP10586 1907 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3DA0A087WVF3 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3IA0A087WXS9 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3EA0A087X179 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3KA0A087X1G2 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3FA6NER0 549 aaPredicted RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 AGAP5A6NIR3 686 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 FAM25AB3EWG3 89 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 FAM25CB3EWG5 89 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 FAM25GB3EWG6 89 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3LB9A6J9 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 J3KR12 359 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 CTDSP2O14595 271 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 EEDO75530 441 aaKnown RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 S1PR4O95977 384 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3HP0C7X1 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 HTR2BP41595 481 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ISL1P61371 349 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3GQ6DHY5 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3CQ6IPX1 549 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ZNF549Q6P9A3 640 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TUBA3EQ6PEY2 450 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 Q6ZPB1 254 aaPredicted RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 TBC1D3Q8IZP1 549 aaPredicted RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 TTC9BQ8N6N2 239 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MRPL43Q8N983 215 aaKnown RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 LINGO1Q96FE5 620 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TXNDC15Q96J42 360 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 SMG9Q9H0W8 520 aaKnown RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 OR51E2Q9H255 320 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 PCDHGC4Q9Y5F7 938 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 CDK2AP1O14519 115 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 CREG1O75629 220 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MATN4O95460 622 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MLYCDO95822 493 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 XKR4Q5GH76 650 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 LY6G5CQ5SRR4 150 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 NRARPQ7Z6K4 114 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 FAM217AQ8IXS0 508 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 OR4L1Q8NH43 312 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 PROKR1Q8TCW9 393 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MBOAT4Q96T53 435 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ITPAQ9BY32 194 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 MMP28Q9H239 520 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 SP140LQ9H930 580 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ZFYVE1Q9HBF4 777 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ISPDA4D126 451 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 CCDC182A6NF36 153 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 HOXC11O43248 304 aaPredicted RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 KRT6AP02538 564 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 KRT6BP04259 564 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 RAB25P57735 213 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ZNF648Q5T619 568 aaPredicted RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 AGAP6Q5VW22 663 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 GDPD3Q7L5L3 318 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 TMEM179BQ7Z7N9 219 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 KRTCAP2Q8N6L1 136 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 GIMAP1Q8WWP7 306 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 AGAP4Q96P64 663 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 GFM1Q96RP9 751 aaKnown RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 NUFIP1Q9UHK0 495 aaKnown RBP11.18□□□□□ -0.62
CCND1-201ENST00000227507 PCDHGB6Q9Y5F9 930 aa11.18□□□□□ -0.62
CCND1-201ENST00000227507 FOCADQ5VW36 1801 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 EPCAMP16422 314 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 DDX39BQ13838 428 aaKnown RBP11.17□□□□□ -0.62
CCND1-201ENST00000227507 UBXN2BQ14CS0 331 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 CPSF6Q16630 551 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCND1-201ENST00000227507 ZNF181Q2M3W8 571 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 C18orf21Q32NC0 220 aaPredicted RBP11.17□□□□□ -0.62
CCND1-201ENST00000227507 TMEM240Q5SV17 173 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 PDZK1Q5T2W1 519 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 HIST2H2AA3Q6FI13 130 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 ZNF605Q86T29 641 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 FAM124AQ86V42 546 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 SIDT2Q8NBJ9 832 aaKnown RBP11.17□□□□□ -0.62
CCND1-201ENST00000227507 DYNC2LI1Q8TCX1 351 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 PSKH2Q96QS6 385 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 CNPPD1Q9BV87 410 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 ATPIF1Q9UII2 106 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 DUSP12Q9UNI6 340 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 FAM92AA1XBS5 289 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 NIPSNAP2O75323 286 aa11.17□□□□□ -0.62
CCND1-201ENST00000227507 TYRP14679 529 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms