RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FUT4P22083 530 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 PRDX6P30041 224 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 IRF5Q13568 498 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 COQ8BQ96D53 544 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 CENPNQ96H22 339 aaPredicted RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 PSKH2Q96QS6 385 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 SEC61A2Q9H9S3 476 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 CENPMQ9NSP4 180 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 PHRF1Q9P1Y6 1649 aaKnown RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 CPNE3O75131 537 aaKnown RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 IFNA6P05013 189 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 CHRM1P11229 460 aaPredicted RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 SLC6A9P48067 706 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 PPP3R1P63098 170 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 FAM131AQ6UXB0 335 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF783Q6ZMS7 281 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 SATL1Q86VE3 508 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 POLR2J3Q9H1A7 115 aaKnown RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 IGKV6D-21A0A0A0MT36 114 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 RPL5P46777 297 aaKnown RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 TM4SF4P48230 202 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 UFM1P61960 85 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 CD47Q08722 323 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 KCTD8Q6ZWB6 473 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 LMO3Q8TAP4 145 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 RFKQ969G6 155 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 SDHAF3Q9NRP4 125 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 MOCS1Q9NZB8 636 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF222Q9UK12 451 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 RLN1P04808 185 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 ACADLP28330 430 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 RNF144AP50876 292 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-201ENST00000223398 PER3P56645 1201 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 MXD1Q05195 221 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 NFKBIDQ8NI38 313 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CD244Q9BZW8 370 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 C8orf33Q9H7E9 229 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-201ENST00000223398 MAGEE1Q9HCI5 957 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CFL2Q9Y281 166 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CCDC182A6NF36 153 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 PAPSS2O95340 614 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-201ENST00000223398 C6P13671 934 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CD72P21854 359 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 RAB6CQ53S08 254 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CLIP4Q8N3C7 705 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 RAB6CQ9H0N0 254 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 LCHNA4D1U4 455 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 WNT7BP56706 349 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 WDR4P57081 412 aaKnown RBP17.91■□□□□ 0.46
CLIP2-201ENST00000223398 MAPK14Q16539 360 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CEACAM20Q6UY09 585 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 RASSF6Q6ZTQ3 369 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF761Q86XN6 746 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-201ENST00000223398 IGDCC3Q8IVU1 814 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 OR10Q1Q8NGQ4 319 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 FETUBQ9UGM5 382 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 H0YGN5 161 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 CRB2Q5IJ48 1285 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 TRAM1L1Q8N609 369 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 OR2L5Q8NG80 312 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 FATE1Q969F0 183 aa17.91■□□□□ 0.46
CLIP2-201ENST00000223398 WDR6Q9NNW5 1121 aaKnown RBP17.91■□□□□ 0.46
CLIP2-201ENST00000223398 INMTO95050 263 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 G6PDP11413 515 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 EN2P19622 333 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-201ENST00000223398 EIF2B2P49770 351 aaKnown RBP17.9■□□□□ 0.46
CLIP2-201ENST00000223398 CST9Q5W186 159 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 OR5T3Q8NGG3 340 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 MRGPRX2Q96LB1 330 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 GINS4Q9BRT9 223 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 DKKL1Q9UK85 242 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 DLGAP4Q9Y2H0 992 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 ETS2P15036 469 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF33AQ06730 810 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 DLG1Q12959 904 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 BNIP1Q12981 228 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 LASP1Q14847 261 aaKnown RBP17.9■□□□□ 0.46
CLIP2-201ENST00000223398 KIAA1161Q6NSJ0 714 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 UMODL1-AS1Q8N2C9 162 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 C2CD4AQ8NCU7 369 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-201ENST00000223398 KIAA1191Q96A73 305 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 BORCS6Q96GS4 357 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 LRRC3Q9BY71 257 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 SLC29A3Q9BZD2 475 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 DHRS7Q9Y394 339 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 C6orf47O95873 294 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 MAGP20916 626 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 OLR1P78380 273 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 LCN1P1Q5VSP4 162 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 DENND5AQ6IQ26 1287 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 IMP4Q96G21 291 aaKnown RBP17.9■□□□□ 0.46
CLIP2-201ENST00000223398 NARS2Q96I59 477 aaKnown RBP17.9■□□□□ 0.46
CLIP2-201ENST00000223398 PTCHD1Q96NR3 888 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 COMMD4Q9H0A8 199 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 LMAN1LQ9HAT1 526 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF846Q147U1 533 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 DOK4Q8TEW6 326 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 ZIC5Q96T25 663 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 CHCHD6Q9BRQ6 235 aa17.9■□□□□ 0.46
CLIP2-201ENST00000223398 KIF13AQ9H1H9 1805 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms