RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CKAP2Q8WWK9 683 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 FAM53CQ9NYF3 392 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 BTRCQ9Y297 605 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 A0A0J9YVX5 310 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 EZRP15311 586 aaKnown RBP26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 CCKBRP32239 447 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 CASP2P42575 452 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 PKNOX1P55347 436 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 GUCY1A3Q02108 690 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 CPSF6Q16630 551 aaKnown RBP eCLIP26.12■■□□□ 1.771e-7■■□□□ 12.2
CHMP4B-201ENST00000217402 ISXQ2M1V0 245 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 PAGE2BQ5JRK9 111 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 LIPJQ5W064 366 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 GRHL2Q6ISB3 625 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 CDYL2Q8N8U2 506 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 L3MBTL4Q8NA19 623 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 AGR3Q8TD06 166 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 DEPDC7Q96QD5 511 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 C20orf27Q9GZN8 174 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 EML4Q9HC35 981 aaKnown RBP26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 TNFRSF12AQ9NP84 129 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 DLL3Q9NYJ7 618 aa26.12■■□□□ 1.77
CHMP4B-201ENST00000217402 FFAR3O14843 346 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 GPR42O15529 346 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 HCRTR1O43613 425 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 OR1F1O43749 312 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 UGDHO60701 494 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 ESRRBO95718 433 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 RBBP5Q15291 538 aaKnown RBP26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 TTC19Q6DKK2 380 aaPredicted RBP26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 KRT78Q8N1N4 520 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 KCNA7Q96RP8 456 aa26.11■■□□□ 1.77
CHMP4B-201ENST00000217402 JUPP14923 745 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 CXCR2P25025 360 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 CSTF2P33240 577 aaKnown RBP eCLIP26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 BCL6P41182 706 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 HNF4AP41235 474 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 GYS2P54840 703 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 LAPTM5Q13571 262 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 E2F2Q14209 437 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 FBXO42Q6P3S6 717 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 TMIGD1Q6UXZ0 262 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 RNF44Q7L0R7 432 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 D2HGDHQ8N465 521 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 GRAMD1AQ96CP6 724 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 ZFYVE21Q9BQ24 234 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 SYNPO2LQ9H987 977 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 PRM3Q9NNZ6 103 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 PILRAQ9UKJ1 303 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 HEATR5BQ9P2D3 2071 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 KCNE1BA0A087WTH5 132 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 TRBC2A0A5B9 178 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 LCMT2O60294 686 aaKnown RBP26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 CRCPO75575 148 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 HGFP14210 728 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 FOLR1P15328 257 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 ZRSR2Q15696 482 aaKnown RBP26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 HIST2H2ACQ16777 129 aaPredicted RBP26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 TMTC4Q5T4D3 741 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 HIST2H2AA3Q6FI13 130 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 ADNP2Q6IQ32 1131 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 DNAJC22Q8N4W6 341 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 MAGEB18Q96M61 343 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 STRADBQ9C0K7 418 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 TRPS1Q9UHF7 1281 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 FIS1Q9Y3D6 152 aa26.1■■□□□ 1.77
CHMP4B-201ENST00000217402 KLF11O14901 512 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 STATHP02808 62 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 CAPN1P07384 714 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 PCNAP12004 261 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 FOXA1P55317 472 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 RPS15AP62244 130 aaKnown RBP26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 GALNT1Q10472 559 aaPredicted RBP26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 GPR19Q15760 415 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 GGTA1PQ4G0N0 100 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 SH2D4BQ5SQS7 431 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 FRMPD2BQ6IN97 320 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 MED27Q6P2C8 311 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 TBC1D19Q8N5T2 526 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 AGBL5Q8NDL9 886 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 SORT1Q99523 831 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 ZNF490Q9ULM2 529 aaPredicted RBP26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 TIMM22Q9Y584 194 aa26.09■■□□□ 1.77
CHMP4B-201ENST00000217402 FAM149AA5PLN7 773 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 HGSO14964 777 aaPredicted RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 POLR3GO15318 223 aaPredicted RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 SNNO75324 88 aaPredicted RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 MDH1P40925 334 aaKnown RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 CYP4F2P78329 520 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 ZC3H12BQ5HYM0 836 aaKnown RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 TCHHL1Q5QJ38 904 aaPredicted RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 CLEC6AQ6EIG7 209 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 ANKRD53Q8N9V6 530 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 METTL6Q8TCB7 284 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 ADAMTS14Q8WXS8 1223 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 N4BP2L2Q92802 583 aaPredicted RBP26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 CHRNA10Q9GZZ6 450 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 THAP1Q9NVV9 213 aa26.08■■□□□ 1.77
CHMP4B-201ENST00000217402 ADAMTS20P59510 1910 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms