RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 OFCC1Q8IZS5 231 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 NMD3Q96D46 503 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CXorf40BQ96DE9 158 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 FAM129BQ96TA1 746 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 RBM4BQ9BQ04 359 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 RBM4Q9BWF3 364 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ING2Q9H160 280 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 EHD1Q9H4M9 534 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CARS2Q9HA77 564 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CERS4Q9HA82 394 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 TRPV4Q9HBA0 871 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 GULP1Q9UBP9 304 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 RPS6KA6Q9UK32 745 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ASF1AQ9Y294 204 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ORC6Q9Y5N6 252 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 DENND4AQ7Z401 1863 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 A0A1B0GTW7 788 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PIPSLA2A3N6 862 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PI15O43692 258 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 SH3BGRLO75368 114 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 BMP10O95393 424 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF682O95780 498 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 B3GALT4O96024 378 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PCCBP05166 539 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ALPLP05186 524 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 C1GALT1C1LP0DN25 315 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ENGP17813 658 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 RPL3P39023 403 aaKnown RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 RPA4Q13156 261 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 BIRC2Q13490 618 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 RUNX3Q13761 415 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 E2F2Q14209 437 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 NFE2L1Q14494 772 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PRAMEF14Q5SWL7 426 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PRAMEF13Q5VWM6 474 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ZCCHC8Q6NZY4 707 aaKnown RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 SPESP1Q6UW49 350 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ADAMTSL4Q6UY14 1074 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 B3GNT6Q6ZMB0 384 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PDZD3Q86UT5 571 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 HEATR4Q86WZ0 1026 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 DCUN1D3Q8IWE4 304 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF555Q8NEP9 628 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 RAD51AP1Q96B01 352 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 SH3KBP1Q96B97 665 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 WDR34Q96EX3 536 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PYURFQ96I23 114 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 SPATA9Q9BWV2 254 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 SGPP1Q9BX95 441 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 LMAN2LQ9H0V9 348 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 NTN4Q9HB63 628 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ATAD3AQ9NVI7 634 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 THAP10Q9P2Z0 257 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF282Q9UDV7 671 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 COL4A3Q01955 1670 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 UPK1AO00322 258 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 FOXE1O00358 373 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 KAT7O95251 611 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PAPLNO95428 1278 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ETHE1O95571 254 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CLIC3O95833 236 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 APODP05090 189 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 KELP23276 732 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 GJA4P35212 333 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 OPRD1P41143 372 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 GZMMP51124 257 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CNTN1Q12860 1018 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 DYNC1I2Q13409 638 aaKnown RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 MYBPC3Q14896 1274 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 NKG7Q16617 165 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CYP2A13Q16696 494 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 VMACQ2NL98 169 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CATSPEREQ5SY80 951 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 TTC23Q5W5X9 447 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CPZQ66K79 652 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ADNP2Q6IQ32 1131 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ANKRD26P1Q6NSI1 321 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CES5AQ6NT32 575 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 TBPL2Q6SJ96 375 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 VITQ6UXI7 678 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 R3HCC1LQ7Z5L2 792 aaKnown RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 GPR141Q7Z602 305 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CAMKMTQ7Z624 323 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 LRRTM4Q86VH4 590 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 AMZ2Q86W34 360 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CACUL1Q86Y37 369 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 HIPK1Q86Z02 1210 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF547Q8IVP9 402 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CLECL1Q8IZS7 167 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ST13P5Q8NFI4 369 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 OR5K1Q8NHB7 308 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 NETO1Q8TDF5 533 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CHTF18Q8WVB6 975 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 C11orf24Q96F05 449 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 CDCA3Q99618 268 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 YTHDF1Q9BYJ9 559 aaKnown RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 ASPSCR1Q9BZE9 553 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 RBM38Q9H0Z9 239 aaKnown RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PRSS16Q9NQE7 514 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 DMRT3Q9NQL9 472 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms