RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 ADAMTS20P59510 1910 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 HELZ2Q9BYK8 2649 aaKnown RBP12.64□□□□□ -0.39
PHGDH-221ENST00000641573 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PRAMEF33A0A0G2JMD5 474 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 SPAARA0A1B0GVQ0 90 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 A6NCN8 305 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 CFAP73A6NFT4 308 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 B2RBV5 119 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PSMD12O00232 456 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-221ENST00000641573 KRT34O76011 436 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 C1GALT1C1LP0DN25 315 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 THRAP10827 490 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 CD1EP15812 388 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PKLRP30613 574 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 DHPSP49366 369 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-221ENST00000641573 RAB28P51157 221 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 NEK2P51955 445 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 ERVK-8P63133 956 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
PHGDH-221ENST00000641573 IRX1P78414 480 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-221ENST00000641573 GSTA3Q16772 222 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 IMPG1Q17R60 797 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 KIF19Q2TAC6 998 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 ZNF542PQ5EBM4 170 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 FRG2Q64ET8 278 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 ATG9BQ674R7 924 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 NXPE4Q6UWF7 544 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 TMPRSS11BQ86T26 416 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PARGQ86W56 976 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 SNX32Q86XE0 403 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PHACTR4Q8IZ21 702 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 OR52E1Q8NGJ3 308 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PIGKQ92643 395 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 SH3KBP1Q96B97 665 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 WDR34Q96EX3 536 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PPP3R2Q96LZ3 170 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 FRG2BQ96QU4 278 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 BTBD10Q9BSF8 475 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 HAUS8Q9BT25 410 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 RAB11FIP5Q9BXF6 653 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 PCBD2Q9H0N5 130 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 XKR8Q9H6D3 395 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 TM9SF3Q9HD45 589 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 KLF15Q9UIH9 416 aa12.64□□□□□ -0.39
PHGDH-221ENST00000641573 TRBV23OR9-2A0A075B6M9 112 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 A0A1W2PPV9 198 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 SERTM1A2A2V5 107 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 H0YIV9 168 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 LSM1O15116 133 aaKnown RBP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 KDM1AO60341 852 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 F3P13726 295 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 CTSEP14091 401 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 IDO1P14902 403 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 EZRP15311 586 aaKnown RBP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 GPX3P22352 226 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 NDUFS1P28331 727 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 BLKP51451 505 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 MNAT1P51948 309 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 ATXN3P54252 364 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 KCNJ2P63252 427 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 HMGCS1Q01581 520 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 EMX2Q04743 252 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 ZNF33BQ06732 778 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 E2F2Q14209 437 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 SLBPQ14493 270 aaKnown RBP eCLIP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 RPS6KA2Q15349 733 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 COL28A1Q2UY09 1125 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 AP5B1Q2VPB7 878 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 AGKQ53H12 422 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 TRIM61Q5EBN2 209 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 CATSPEREQ5SY80 951 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 LAYNQ6UX15 382 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 GK5Q6ZS86 529 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 LPCAT2Q7L5N7 544 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 IQCHQ86VS3 1027 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 TMEFF1Q8IYR6 380 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 MIER2Q8N344 545 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 LINC01555Q8NAE3 123 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 FNDC5Q8NAU1 212 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 OR2L8Q8NGY9 312 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 RP9Q8TA86 221 aaKnown RBP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 HMGCLL1Q8TB92 370 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 WDR20Q8TBZ3 569 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 CXorf40BQ96DE9 158 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 EFCAB11Q9BUY7 163 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 C1orf50Q9BV19 199 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 ACPTQ9BZG2 426 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 EHD1Q9H4M9 534 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 KIR3DX1Q9H7L2 352 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 LRTM1Q9HBL6 345 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 AIG1Q9NVV5 245 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 TAAR2Q9P1P5 351 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 ZNF624Q9P2J8 865 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-221ENST00000641573 TAC3Q9UHF0 121 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms