RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 O00370 1275 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 ADAM20O43506 726 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 BCL2L11O43521 198 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 GFPT2O94808 682 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 PGM3O95394 542 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 DNAH10OSP0CZ25 163 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 GP1BBP13224 206 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 CYP11B2P19099 503 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 CD22P20273 847 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 ELAVL4P26378 380 aaKnown RBP3.84□□□□□ -1.79
CCDC7-216ENST00000640058 ALDH1B1P30837 517 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 LHX1P48742 406 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 DHODHQ02127 395 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 PRKG2Q13237 762 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 LETM2Q2VYF4 491 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 HIGD2BQ4VC39 106 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 BMP2KLQ5H9B9 411 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 HYIQ5T013 277 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 Q6ZR54 194 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 SLC25A42Q86VD7 318 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 ZNF584Q8IVC4 421 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 SYT2Q8N9I0 419 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-216ENST00000640058 C9orf43Q8TAL5 461 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-216ENST00000640058 MAP3K3Q99759 626 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 NOL11Q9H8H0 719 aaKnown RBP3.84□□□□□ -1.79
CCDC7-216ENST00000640058 CTSZQ9UBR2 303 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 RPS6KA6Q9UK32 745 aa3.84□□□□□ -1.79
CCDC7-216ENST00000640058 hCG_1809904A0A1W2PP81 198 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 A0A1W2PPE2 198 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 A0A1W2PPK0 400 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 A0A1W2PR64 198 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 SHISA9B4DS77 424 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 AHCYL1O43865 530 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 IL4RP24394 825 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ETV5P41161 510 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 LMAN1P49257 510 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ALDH3A2P51648 485 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 FCHO2Q0JRZ9 810 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 SGCGQ13326 291 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 VWC2Q2TAL6 325 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ZBTB49Q6ZSB9 765 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 PCGF5Q86SE9 256 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 FAM131BQ86XD5 332 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ZFAND4Q86XD8 727 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 SLC4A11Q8NBS3 891 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 OR5T2Q8NGG2 359 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ZPLD1Q8TCW7 415 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 METTL21AQ8WXB1 218 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ATL1Q8WXF7 558 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 PIK3R3Q92569 461 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 ZNF597Q96LX8 424 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 APOL6Q9BWW8 343 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 HEXA-AS1Q9H8Q6 139 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 CDH20Q9HBT6 801 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 GPN1Q9HCN4 374 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-216ENST00000640058 THAP10Q9P2Z0 257 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-216ENST00000640058 LNPEPQ9UIQ6 1025 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 SNX8Q9Y5X2 465 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 AGRNO00468 2067 aa3.83□□□□□ -1.8
CCDC7-216ENST00000640058 IGSF1Q8N6C5 1336 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 CASTOR2A6NHX0 329 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 NPIPB9F8W1W9 429 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 LRCH4O75427 683 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 ERAL1O75616 437 aaKnown RBP3.82□□□□□ -1.8
CCDC7-216ENST00000640058 CEACAM4O75871 244 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 HOXD4P09016 255 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-216ENST00000640058 FOLR2P14207 255 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 EIF5P55010 431 aaKnown RBP3.82□□□□□ -1.8
CCDC7-216ENST00000640058 TMED8Q6PL24 325 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-216ENST00000640058 CLEC4GQ6UXB4 293 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 SLC24A5Q71RS6 500 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 FCRLAQ7L513 359 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 TC2NQ8N9U0 490 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 NOA1Q8NC60 698 aaKnown RBP3.82□□□□□ -1.8
CCDC7-216ENST00000640058 NPRL2Q8WTW4 380 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 KCNE4Q8WWG9 221 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 TOMM40LQ969M1 308 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 CPNE1Q99829 537 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 BAIAP2L1Q9UHR4 511 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 STYXL1Q9Y6J8 313 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 ADAMTS9Q9P2N4 1935 aa3.82□□□□□ -1.8
CCDC7-216ENST00000640058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 PTGESO14684 152 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 SNAP91O60641 907 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 IGKV3-15P01624 115 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 MELTFP08582 738 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 CDC25CP30307 473 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 DCDC1P59894 354 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 POLR2LP62875 67 aaKnown RBP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 RASGEF1BQ0VAM2 473 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 ZNF177Q13360 481 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 TRA2AQ13595 282 aaKnown RBP eCLIP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 NONOQ15233 471 aaKnown RBP eCLIP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 NPTX1Q15818 432 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 SEL1L3Q68CR1 1132 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 OR4C11Q6IEV9 310 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 CTR9Q6PD62 1173 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms