RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	PKP4	Q99569	1192 aa		13.97	□□□□□ -0.17
TARDBP-231	ENST00000639599	ABI3	Q9P2A4	366 aa		13.97	□□□□□ -0.17
TARDBP-231	ENST00000639599	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.97	□□□□□ -0.17
TARDBP-231	ENST00000639599	MKL2	Q9ULH7	1088 aa		13.97	□□□□□ -0.17
TARDBP-231	ENST00000639599	IGLV3-12	A0A075B6K2	115 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599		A0A0A6YYC8	382 aa	Predicted RBP	13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	ARHGAP10	A1A4S6	786 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599		I3L1I5	382 aa	Predicted RBP	13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	E2F3	O00716	465 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	HNRNPR	O43390	633 aa	Known RBP	13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	KLHL18	O94889	574 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	MED26	O95402	600 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	CRYAB	P02511	175 aa	Known RBP	13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	ENO3	P13929	434 aa	Predicted RBP	13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	CASP6	P55212	293 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	PRDX1	Q06830	199 aa	Known RBP	13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599		Q0VFX4	171 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	GPS1	Q13098	491 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	HKDC1	Q2TB90	917 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	MINDY4	Q4G0A6	757 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	ARMC3	Q5W041	872 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	ATG9B	Q674R7	924 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	FBXO42	Q6P3S6	717 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	NEK10	Q6ZWH5	1172 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	CILP2	Q8IUL8	1156 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	REXO1L1P	Q8IX06	675 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	PALM2	Q8IXS6	379 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	PPFIBP2	Q8ND30	876 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	TRIM58	Q8NG06	486 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	CALML6	Q8TD86	181 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	MOCOS	Q96EN8	888 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	PLA2G3	Q9NZ20	509 aa		13.96	□□□□□ -0.17
TARDBP-231	ENST00000639599	SPEN	Q96T58	3664 aa	Known RBP	13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	SHANK1	Q9Y566	2161 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	IGHV1-45	A0A0A0MS14	117 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	MAGEB16	A2A368	324 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	PRSS44	E7EML9	344 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZG16	O60844	167 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	RASAL1	O95294	804 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	SLC16A8	O95907	504 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	F10	P00742	488 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	C8orf89	P0DMQ9	161 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	ERG	P11308	486 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	ARNT	P27540	789 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZNF33B	Q06732	778 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	CUL1	Q13616	776 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	SIX1	Q15475	284 aa	Predicted RBP	13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZRSR2	Q15696	482 aa	Known RBP	13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	C1QL3	Q5VWW1	255 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	LAPTM4B	Q86VI4	370 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	TUBB6	Q9BUF5	446 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	COPG2	Q9UBF2	871 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	MAD1L1	Q9Y6D9	718 aa		13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.95	□□□□□ -0.18
TARDBP-231	ENST00000639599	USP9Y	O00507	2555 aa	Predicted RBP	13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	PIKFYVE	Q9Y2I7	2098 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	TRGV8	A0A0C4DH27	118 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	SDR42E2	A6NKP2	422 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	HAT1	O14929	419 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	MLYCD	O95822	493 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	KRT14	P02533	472 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	MPC1L	P0DKB6	136 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	HRH2	P25021	359 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	GRK3	P35626	688 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	TNFSF10	P50591	281 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	FAM53B	Q14153	422 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	GBX1	Q14549	363 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	KCNJ11	Q14654	390 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	LRRC8E	Q6NSJ5	796 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	UGT3A1	Q6NUS8	523 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	MTFR2	Q6P444	385 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	TMEM207	Q6UWW9	146 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	UBE2R2	Q712K3	238 aa	Predicted RBP	13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZNF480	Q8WV37	535 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	NR4A3	Q92570	626 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	KCNJ9	Q92806	393 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	HAS2	Q92819	552 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	MARVELD3	Q96A59	401 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	OR2A5	Q96R48	311 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	SLX1A	Q9BQ83	275 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	TGIF2	Q9GZN2	237 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	XAB2	Q9HCS7	855 aa	Known RBP	13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	KLHL42	Q9P2K6	505 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	COMMD10	Q9Y6G5	202 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	FLNC	Q14315	2725 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	ICE1	Q9Y2F5	2266 aa		13.94	□□□□□ -0.18
TARDBP-231	ENST00000639599	FAM237B	A0A1B0GVD1	139 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	TCRBV7S3A2	A0A539	114 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599		A8MUI8	341 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599		E7ENX8	843 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	AVIL	O75366	819 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	WDPCP	O95876	746 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	STS	P08842	583 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	CXCR5	P32302	372 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	SOX11	P35716	441 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	SLC26A3	P40879	764 aa		13.93	□□□□□ -0.18

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