RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 VSTM2BA6NLU5 285 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MKRN2OSH3BPM6 223 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MYO1CO00159 1063 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 AP3B1O00203 1094 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SOCS6O14544 535 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 NDUFAB1O14561 156 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 PSIP1O75475 530 aaKnown RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 FAM107AO95990 144 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 KLK3P07288 261 aaPredicted RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 SSTR1P30872 391 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MSH2P43246 934 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 OR1D4P47884 311 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 TTPAP49638 278 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SLC18A1P54219 525 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MPP1Q00013 466 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 CTBP1Q13363 440 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 RAPSNQ13702 412 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 TMED2Q15363 201 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 NKG7Q16617 165 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SYTL3Q4VX76 610 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MLIPQ5VWP3 458 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 HIST2H2BCQ6DN03 193 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 PTRHD1Q6GMV3 140 aaKnown RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 NEPROQ6NW34 567 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 CYB5D1Q6P9G0 228 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 CNSTQ6PJW8 725 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 ADGRD1Q6QNK2 874 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SUSD1Q6UWL2 747 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 RNF44Q7L0R7 432 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 TRABD2AQ86V40 505 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SRRM1Q8IYB3 904 aaKnown RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 METTL27Q8N6F8 245 aaPredicted RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 OR2L3Q8NG85 312 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 OR2Y1Q8NGV0 311 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 FBF1Q8TES7 1133 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.5□□□□□ -1.21
PNKP-229ENST00000637897 C19orf60Q96EN9 201 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 PKP4Q99569 1192 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MIPEPQ99797 713 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 NAT9Q9BTE0 207 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 DHRS4Q9BTZ2 278 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SLC25A23Q9BV35 468 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 CCDC134Q9H6E4 229 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 ZNF552Q9H707 407 aaPredicted RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 FBXO6Q9NRD1 293 aaPredicted RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 NKIRAS1Q9NYS0 192 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 BFARQ9NZS9 450 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SLC17A6Q9P2U8 582 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 CTNNAL1Q9UBT7 734 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 CTSFQ9UBX1 484 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 ZC3H7BQ9UGR2 993 aaKnown RBP7.5□□□□□ -1.21
PNKP-229ENST00000637897 TBK1Q9UHD2 729 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 GNPTGQ9UJJ9 305 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 IKZF3Q9UKT9 509 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 SH2B3Q9UQQ2 575 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 NTNG1Q9Y2I2 539 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 MAP4K5Q9Y4K4 846 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 IKBKGQ9Y6K9 419 aa7.5□□□□□ -1.21
PNKP-229ENST00000637897 PRRC2CQ9Y520 2896 aaKnown RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 IQANK1A0A1B0GTG1 560 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 FAM237BA0A1B0GVD1 139 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 TCRBV9S1A1TA0A576 114 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 TMEM120BA0PK00 339 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 SDR42E2A6NKP2 422 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 GFYI3L273 518 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 P2RX6O15547 441 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 PRPF4O43172 522 aaKnown RBP eCLIP7.49□□□□□ -1.21
PNKP-229ENST00000637897 NDUFS3O75489 264 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 HAUS5O94927 633 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 APOA4P06727 396 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 PKMP14618 531 aaKnown RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 KRT15P19012 456 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 OGNP20774 298 aaKnown RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 GNLYP22749 145 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 GCAP28676 217 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 OTX2P32243 289 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 SLC1A2P43004 574 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 DCDP81605 110 aaKnown RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 SSPNQ14714 243 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 PRTGQ2VWP7 1150 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 PLEKHN1Q494U1 663 aaPredicted RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 AARS2Q5JTZ9 985 aaKnown RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 DCAF10Q5QP82 559 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 LGSNQ5TDP6 509 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 SLC6A19Q695T7 634 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 ZNF425Q6IV72 752 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 JMJD6Q6NYC1 403 aaPredicted RBP7.49□□□□□ -1.21
PNKP-229ENST00000637897 TLDC1Q6P9B6 456 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 KIRREL2Q6UWL6 708 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 CAPN12Q6ZSI9 719 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 SHISA6Q6ZSJ9 500 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 TTLL10Q6ZVT0 673 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 CYS1Q717R9 158 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 OTOAQ7RTW8 1153 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 OVCH1Q7RTY7 1134 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 LAPTM4BQ86VI4 370 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 PAQR7Q86WK9 346 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 LRRC6Q86X45 466 aa7.49□□□□□ -1.21
PNKP-229ENST00000637897 TEX19Q8NA77 164 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms