RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CYHR1Q6ZMK1 362 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 ARHGEF39Q8N4T4 335 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 CATSPER1Q8NEC5 780 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 ASB11Q8WXH4 323 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 PSMF1Q92530 271 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 TGIF2Q9GZN2 237 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 UTP6Q9NYH9 597 aaKnown RBP17.56■□□□□ 0.4
CLN6-220ENST00000637450 SAMD15Q9P1V8 674 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 TRPC4Q9UBN4 977 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 MED16Q9Y2X0 877 aa17.56■□□□□ 0.4
CLN6-220ENST00000637450 CRYBG3Q68DQ2 2970 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 ZCWPW2A0A1B0GU75 182 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 CTAGE9A4FU28 777 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 IDSB3KWA1 339 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 GFYI3L273 518 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 FOXS1O43638 330 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 CCNDBP1O95273 360 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 PRR35P0CG20 571 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 EZRP15311 586 aaKnown RBP17.55■□□□□ 0.4
CLN6-220ENST00000637450 SOX11P35716 441 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 ABATP80404 500 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 CTBP1Q13363 440 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 TTLL9Q3SXZ7 439 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 ZNF787Q6DD87 383 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 ZNF470Q6ECI4 717 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 TTC27Q6P3X3 843 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 ZNF549Q6P9A3 640 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 DENND6AQ8IWF6 608 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 LRRC56Q8IYG6 542 aaPredicted RBP17.55■□□□□ 0.4
CLN6-220ENST00000637450 AMER3Q8N944 861 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 PPFIBP2Q8ND30 876 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 MCUQ8NE86 351 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 GIMAP7Q8NHV1 300 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 RERGQ96A58 199 aaPredicted RBP17.55■□□□□ 0.4
CLN6-220ENST00000637450 ZNF669Q96BR6 464 aaPredicted RBP17.55■□□□□ 0.4
CLN6-220ENST00000637450 MMABQ96EY8 250 aaPredicted RBP17.55■□□□□ 0.4
CLN6-220ENST00000637450 YIPF2Q9BWQ6 316 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 MKKSQ9NPJ1 570 aaPredicted RBP17.55■□□□□ 0.4
CLN6-220ENST00000637450 C14orf105Q9NVL8 296 aa17.55■□□□□ 0.4
CLN6-220ENST00000637450 NUP210LQ5VU65 1888 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 TXNDC9O14530 226 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 FFAR3O14843 346 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 GPR42O15529 346 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 SERPINA7P05543 415 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 HEXBP07686 556 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 F7P08709 466 aaPredicted RBP17.54■□□□□ 0.4
CLN6-220ENST00000637450 MPC1LP0DKB6 136 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 FDXRP22570 491 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 CXCR2P25025 360 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 DCTP40126 519 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 CUL1Q13616 776 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 THOC5Q13769 683 aaKnown RBP17.54■□□□□ 0.4
CLN6-220ENST00000637450 SPNS2Q8IVW8 549 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 OR1N1Q8NGS0 311 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 BRIX1Q8TDN6 353 aaKnown RBP17.54■□□□□ 0.4
CLN6-220ENST00000637450 KCNJ9Q92806 393 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 XAB2Q9HCS7 855 aaKnown RBP17.54■□□□□ 0.4
CLN6-220ENST00000637450 FBXO6Q9NRD1 293 aaPredicted RBP17.54■□□□□ 0.4
CLN6-220ENST00000637450 PCYOX1Q9UHG3 505 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 OSGIN2Q9Y236 505 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 DHRS7Q9Y394 339 aa17.54■□□□□ 0.4
CLN6-220ENST00000637450 MYO9AB2RTY4 2548 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 IGHV1-45A0A0A0MS14 117 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 A0A0A6YYC8 382 aaPredicted RBP17.53■□□□□ 0.4
CLN6-220ENST00000637450 I3L1I5 382 aaPredicted RBP17.53■□□□□ 0.4
CLN6-220ENST00000637450 SMAPO00193 183 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 PCDH17O14917 1159 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 HAT1O14929 419 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 LRRTM2O43300 516 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 ZBTB14O43829 449 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 ANXA5P08758 320 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 ENO3P13929 434 aaPredicted RBP17.53■□□□□ 0.4
CLN6-220ENST00000637450 SKIV2L2P42285 1042 aaKnown RBP17.53■□□□□ 0.4
CLN6-220ENST00000637450 ARG2P78540 354 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 FAM53BQ14153 422 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 FAAH2Q6GMR7 532 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 LRRC8AQ8IWT6 810 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 RASGEF1CQ8N431 466 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 HAS2Q92819 552 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 MAGOHBQ96A72 148 aaKnown RBP17.53■□□□□ 0.4
CLN6-220ENST00000637450 SERPINB12Q96P63 405 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 EBNA1BP2Q99848 306 aaKnown RBP17.53■□□□□ 0.4
CLN6-220ENST00000637450 SLX1AQ9BQ83 275 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 DRC3Q9H069 523 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 CCDC68Q9H2F9 335 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 PTGFRNQ9P2B2 879 aa17.53■□□□□ 0.4
CLN6-220ENST00000637450 LOC102723996A0A087X1L8 192 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 DYTNA2CJ06 578 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 GOLGA8MH3BSY2 632 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 P2RX6O15547 441 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 KIF5CO60282 957 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 BMP10O95393 424 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 SYF2O95926 243 aaKnown RBP17.52■□□□□ 0.4
CLN6-220ENST00000637450 SLC1A2P43004 574 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 TNFSF10P50591 281 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 EEF1A2Q05639 463 aaKnown RBP17.52■□□□□ 0.4
CLN6-220ENST00000637450 SYT16Q17RD7 645 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 TMEM205Q6UW68 189 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 FAM180AQ6UWF9 173 aa17.52■□□□□ 0.4
CLN6-220ENST00000637450 RIPOR1Q6ZS17 1223 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms