RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 IFNB1P01574 187 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 ESR1P03372 595 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 EIF2S1P05198 315 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 CELA2AP08217 269 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 PKMP14618 531 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 EZRP15311 586 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 NMBRP28336 390 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 RPL22P35268 128 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 HSD17B2P37059 387 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 ZNF75DP51815 510 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 SIX1Q15475 284 aaPredicted RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 HKDC1Q2TB90 917 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 ANKRD20A4Q4UJ75 823 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 LRRC8BQ6P9F7 803 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 TMEM207Q6UWW9 146 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 PCGF5Q86SE9 256 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 PRUNE1Q86TP1 453 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 SLC13A5Q86YT5 568 aaPredicted RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 LRRC56Q8IYG6 542 aaPredicted RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 CSNK1A1LQ8N752 337 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 CABS1Q96KC9 395 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 TUBB6Q9BUF5 446 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 MRPS30Q9NP92 439 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 ZNF148Q9UQR1 794 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 DRG1Q9Y295 367 aaKnown RBP15.58■□□□□ 0.08
CLN3-255ENST00000637100 ZNF835Q9Y2P0 537 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 C2CD3Q4AC94 2353 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 HEATR5BQ9P2D3 2071 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 NCOA6Q14686 2063 aaPredicted RBP15.57■□□□□ 0.08
CLN3-255ENST00000637100 E7ENX8 843 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 PRAMEF2O60811 474 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 RASAL1O95294 804 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 ERVK-10P10266 1014 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 ABATP80404 500 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 TAP2Q03519 686 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 EEF1A2Q05639 463 aaKnown RBP15.57■□□□□ 0.08
CLN3-255ENST00000637100 KIF5AQ12840 1032 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 NAA30Q147X3 362 aaPredicted RBP15.57■□□□□ 0.08
CLN3-255ENST00000637100 CCNG2Q16589 344 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 ICE2Q659A1 982 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 HIBCHQ6NVY1 386 aaPredicted RBP15.57■□□□□ 0.08
CLN3-255ENST00000637100 XKRXQ6PP77 449 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 C4orf22Q6V702 233 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 NEK10Q6ZWH5 1172 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 MRGPRGQ86SM5 289 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 DRC3Q9H069 523 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 KLHL42Q9P2K6 505 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 GALPQ9UBC7 116 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 CAPN6Q9Y6Q1 641 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 ADGRG4Q8IZF6 3080 aa15.57■□□□□ 0.08
CLN3-255ENST00000637100 CSMD2Q7Z408 3487 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 AKAP9Q99996 3911 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 HIVEP1P15822 2718 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 KCNE1BA0A087WTH5 132 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 H0YIG0 161 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 NIPSNAP2O75323 286 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 WISP2O76076 250 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 UNC5CO95185 931 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 HEXBP07686 556 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 EIF3BP55884 814 aaKnown RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 SNRPNP63162 240 aaKnown RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 CRADDP78560 199 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 CDK16Q00536 496 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 RNF187Q5TA31 235 aaPredicted RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 PLAG1Q6DJT9 500 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 SUSD1Q6UWL2 747 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 Q6ZPB1 254 aaPredicted RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 AMER2Q8N7J2 671 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 ACBD4Q8NC06 268 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 THAP3Q8WTV1 239 aaPredicted RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 ZNF480Q8WV37 535 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 MFSD3Q96ES6 412 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 MMABQ96EY8 250 aaPredicted RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 MAGEB10Q96LZ2 347 aaPredicted RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 PKP4Q99569 1192 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 ACAT2Q9BWD1 397 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 TRIM8Q9BZR9 551 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 STMN3Q9NZ72 180 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 BFARQ9NZS9 450 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 SUCOQ9UBS9 1254 aaKnown RBP15.56■□□□□ 0.08
CLN3-255ENST00000637100 SEC14L3Q9UDX4 400 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 MED16Q9Y2X0 877 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 F8P00451 2351 aa15.56■□□□□ 0.08
CLN3-255ENST00000637100 PKDREJQ9NTG1 2253 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 GFYI3L273 518 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 CCL21O00585 134 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 CDK2AP1O14519 115 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 P2RX6O15547 441 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 ZSCAN5DPP0CG00 497 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 MYBL2P10244 700 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 OGNP20774 298 aaKnown RBP15.55■□□□□ 0.08
CLN3-255ENST00000637100 HTR1EP28566 365 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 FMO4P31512 558 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 SKIV2L2P42285 1042 aaKnown RBP15.55■□□□□ 0.08
CLN3-255ENST00000637100 PNLIPRP1P54315 467 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 RIPPLY3P57055 190 aa15.55■□□□□ 0.08
CLN3-255ENST00000637100 SESN2P58004 480 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms