RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PCBD2Q9H0N5 130 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 EPB41L1Q9H4G0 881 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 PCTPQ9UKL6 214 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 DYRK1BQ9Y463 629 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 ENTPD2Q9Y5L3 495 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 SPAARA0A1B0GVQ0 90 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 E2F3O00716 465 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 CAPN5O15484 640 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 KCNK5O95279 499 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 CBX6O95503 412 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 FGF3P11487 239 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 EPB42P16452 691 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 NPPBP16860 134 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 TSPAN8P19075 237 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 ARL1P40616 181 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 NOVA1P51513 510 aaKnown RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 PPP1CAP62136 330 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 MRPS35P82673 323 aaKnown RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 SF3A3Q12874 501 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 CDC16Q13042 620 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 GTF2H2Q13888 395 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 RBBP7Q16576 425 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 GTF2H2CQ6P1K8 395 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 METTL2BQ6P1Q9 378 aaKnown RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 LCTLQ6UWM7 567 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 FAM92BQ6ZTR7 304 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 TRIM73Q86UV7 250 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 FAM20CQ8IXL6 584 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 KLHDC8AQ8IYD2 350 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 OR2A1Q8NGT9 310 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 ZNF483Q8TF39 744 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 ATP6V1E2Q96A05 226 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 TGM7Q96PF1 710 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 OR2A14Q96R47 310 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 HAUS8Q9BT25 410 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 C1QTNF3Q9BXJ4 246 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 ABCG4Q9H172 646 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 LRRN3Q9H3W5 708 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 SEMA4BQ9NPR2 832 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 KLHL3Q9UH77 587 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 ATXN7L1Q9ULK2 861 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 KCNE2Q9Y6J6 123 aa13.91□□□□□ -0.18
LINC00339-208ENST00000634934 CNOT1A5YKK6 2376 aaKnown RBP13.91□□□□□ -0.18
LINC00339-208ENST00000634934 MATN2O00339 956 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 PRICKLE3O43900 615 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 CCNDBP1O95273 360 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 SERPINE1P05121 402 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 GP1BAP07359 652 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 MPSTP25325 297 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 PRDX3P30048 256 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 PIK3CGP48736 1102 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 ACADVLP49748 655 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 GFERP55789 205 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 YBX1P67809 324 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 CLCQ05315 142 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 TRIP6Q15654 476 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 ZRSR2Q15696 482 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 DNAL1Q4LDG9 190 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 SPESP1Q6UW49 350 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 C17orf64Q86WR6 236 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 TRPC4APQ8TEL6 797 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 ZDHHC12Q96GR4 267 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 NOL11Q9H8H0 719 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 IPPKQ9H8X2 491 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 MRPS30Q9NP92 439 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 THAP1Q9NVV9 213 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 STX18Q9P2W9 335 aaKnown RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 POMT2Q9UKY4 750 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 SH2B3Q9UQQ2 575 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 ASXL3Q9C0F0 2248 aa13.9□□□□□ -0.18
LINC00339-208ENST00000634934 COL5A1P20908 1838 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-208ENST00000634934 A0A1W2PQM1 296 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 A6NHS1 94 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CLGNO14967 610 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 GYG2O15488 501 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 H2AFYO75367 372 aaKnown RBP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 KATNA1O75449 491 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 SERPINA6P08185 405 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CDH1P12830 882 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 ALOX15P16050 662 aaPredicted RBP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CSRP1P21291 193 aaKnown RBP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 SERPINB3P29508 390 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CMPK1P30085 196 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CSF2RBP32927 897 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 VHLP40337 213 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CCR10P46092 362 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 CFHR1Q03591 330 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 PRDX1Q06830 199 aaKnown RBP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 SNAP47Q5SQN1 464 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 FRMD7Q6ZUT3 714 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 PLXDC1Q8IUK5 500 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 OR2L3Q8NG85 312 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 FLVCR1-AS1Q8TAF5 88 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 SLC5A11Q8WWX8 675 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 NEIL2Q969S2 332 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 THOC1Q96FV9 657 aaKnown RBP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 PPM1MQ96MI6 270 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 GFM1Q96RP9 751 aaKnown RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms