RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 OR1D2P34982 312 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 GRM5P41594 1212 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 CHIT1Q13231 466 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC30A2Q9BRI3 323 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 ICKQ9UPZ9 632 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 MSI1O43347 362 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 STBD1O95210 358 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR12D2P58182 307 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 CLRN1P58418 232 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 ZNF550Q7Z398 422 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 NPAS4Q8IUM7 802 aa12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 REXO2Q9Y3B8 237 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-208ENST00000629380 CDK14O94921 469 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 BLMHQ13867 455 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SHC3Q92529 594 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 DUSP26Q9BV47 211 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 YTHDF1Q9BYJ9 559 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ANKRD31Q8N7Z5 1873 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 MAP2K7O14733 419 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 FGL1Q08830 312 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 MBOAT1Q6ZNC8 495 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR52E4Q8NGH9 312 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 CPT1CQ8TCG5 803 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 FAM105AQ9NUU6 356 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 A0A1W2PRQ8 180 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 BHMG1C9JSJ3 638 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 LRRN3E7EW58 273 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 NDUFS4O43181 175 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 CSN2P05814 226 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ADRB2P07550 413 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 BCKDHAP12694 445 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ENDOUP21128 410 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 CASP6P55212 293 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SMPDL3BQ92485 455 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 LRRN3Q9H3W5 708 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 DNAJB9Q9UBS3 223 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PEX12O00623 359 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PCDHGA12O60330 932 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 HSD17B12Q53GQ0 312 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 HID1Q8IV36 788 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 GID4Q8IVV7 300 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 DNTTIP1Q9H147 329 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 HTR1AP08908 422 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SPARCP09486 303 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PRPS1L1P21108 318 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SIM2Q14190 667 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 DHCR24Q15392 516 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 C22orf15Q8WYQ4 148 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ASB6Q9NWX5 421 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 TAS2R1Q9NYW7 299 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 CCRL2O00421 344 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ELOAQ14241 798 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 POLR2J2Q9GZM3 115 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PLK2Q9NYY3 685 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 DNMT3AQ9Y6K1 912 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 ELNP15502 786 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 MATN1P21941 496 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 S100A7P31151 101 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PBX3P40426 434 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 SYT16Q17RD7 645 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 RPL13AP3Q6NVV1 102 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 VASH1Q7L8A9 365 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR10A6Q8NH74 314 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 HHLA1C9JL84 531 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 C7orf57Q8NEG2 295 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR5T2Q8NGG2 359 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 LPPQ93052 612 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 P2RY11Q96G91 374 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 CD180Q99467 661 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 C19orf12Q9NSK7 152 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 PNPOQ9NVS9 261 aa12.86□□□□□ -0.35
SYNGAP1-208ENST00000629380 A0A1B0GVI7 797 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 MT-ND5P03915 603 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 KCNJ5P48544 419 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 OGFOD2Q6N063 350 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CFAP52Q8N1V2 620 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC25A36Q96CQ1 311 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms