RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PATE1Q8WXA2 126 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 TCEAL3Q969E4 200 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 MAGEB10Q96LZ2 347 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 C3orf30Q96M34 536 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 ERVK-6Q9BXR3 956 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 KLHL4Q9C0H6 718 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 LRIT1Q9P2V4 623 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 CPNE7Q9UBL6 633 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PCDHGB4Q9UN71 923 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PCDHGB5Q9Y5G0 923 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PRSS51A0A1B0GVH4 220 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 CCDC160A6NGH7 325 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 NR5A2O00482 541 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 TRIM38O00635 465 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 KERAO60938 352 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 OTCP00480 354 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 IDO1P14902 403 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 CD1DP15813 335 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 SHMT2P34897 504 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 GRIK2Q13002 908 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 CHIT1Q13231 466 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 UNC50Q53HI1 259 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 ZNF678Q5SXM1 525 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 AIF1LQ9BQI0 150 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 TEX101Q9BY14 249 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 NOL11Q9H8H0 719 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 SMOXQ9NWM0 555 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 GALPQ9UBC7 116 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 DTNAQ9Y4J8 743 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 OBSL1O75147 1896 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 ZNF106Q9H2Y7 1883 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 GNG14A0A1W2PPG7 69 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 MAGEA13PA6NCF6 341 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 MSX2P35548 267 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PSME3P61289 254 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 COL9A2Q14055 689 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 KIAA1191Q96A73 305 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 NPAS2Q99743 824 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 RHBGQ9H310 441 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PADI4Q9UM07 663 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 DYTNA2CJ06 578 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 PPP6CO00743 305 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 AOAHP28039 575 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 PI4KAP42356 2102 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 TGM3Q08188 693 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 AMIGO1Q86WK6 493 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 SDR16C5Q8N3Y7 309 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 ASB12Q8WXK4 309 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 C19orf60Q96EN9 201 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 SH3GL1Q99961 368 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 AP3M1Q9Y2T2 418 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 TPRP12270 2363 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 KIR2DS5A0A0G2JLQ3 304 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 A0A0G2JNG1 304 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 A0A1B0GTL3 188 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 KIR2DS3K7RE56 304 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 DUX1O43812 170 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 DFNA5O60443 496 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 BCAS2O75934 225 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 ALDOCP09972 364 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 HSD17B2P37059 387 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 CLCQ05315 142 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 NFYCQ13952 458 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 SPIDRQ14159 915 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 KIR2DS5Q14953 304 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 GK5Q6ZS86 529 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 PDZD3Q86UT5 571 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 NLRP8Q86W28 1048 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 FUNDC1Q8IVP5 155 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 ZNF655Q8N720 491 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 UBE2E3Q969T4 207 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 REPS1Q96D71 796 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 FANCEQ9HB96 536 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 RDH14Q9HBH5 336 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 TMEM9BQ9NQ34 198 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC52A3Q9NQ40 469 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC23A2Q9UGH3 650 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 UNC13CQ8NB66 2214 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 RGS14O43566 566 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR1F1O43749 312 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 MPC1LP0DKB6 136 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 ALAS2P22557 587 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR4D1Q15615 310 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 UGT2A3Q6UWM9 527 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 TMEM102Q8N9M5 508 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 PPP3R2Q96LZ3 170 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 TBC1D29Q9UFV1 150 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 BDP1A6H8Y1 2624 aa12.04□□□□□ -0.48
SYNGAP1-207ENST00000628646 A0A0J9YVX5 310 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 K7ESF4 209 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 YY2O15391 372 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 NRP2O60462 931 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 CSTF2P33240 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 GRIA3P42263 894 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms