RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 C3orf18Q9UK00 162 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 NXT1Q9UKK6 140 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 DHRS7Q9Y394 339 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 LRBAP50851 2863 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
SOX2-OT-241ENST00000626948 SVILO95425 2214 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 SDR42E2A6NKP2 422 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 JRKO75564 520 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 WISP2O76076 250 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 HPP00738 406 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 FBLP22087 321 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 EMP3P54852 163 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 SRSF11Q05519 484 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 DSG2Q14126 1118 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 ARHGAP19Q14CB8 494 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 MUM1Q2TAK8 710 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 CASC4Q6P4E1 433 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 CCDC137Q6PK04 289 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 MBOAT1Q6ZNC8 495 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 LINC00696Q6ZRV3 163 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 NEK10Q6ZWH5 1172 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZC3H7AQ8IWR0 971 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 CPNE9Q8IYJ1 553 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 CSNK1A1LQ8N752 337 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 DNAJB14Q8TBM8 379 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 GRHL3Q8TE85 626 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 KCNJ9Q92806 393 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 CABS1Q96KC9 395 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 CCDC138Q96M89 665 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 AGAP4Q96P64 663 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 MACROD1Q9BQ69 325 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 SLC29A3Q9BZD2 475 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 SLC17A6Q9P2U8 582 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 MRFAP1Q9Y605 127 aa12.85□□□□□ -0.35
SOX2-OT-241ENST00000626948 SCN3AQ9NY46 2000 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 IGHV1-45A0A0A0MS14 117 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 A0A0A6YYC8 382 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 OR2W5A6NFC9 320 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 IDSB3KWA1 339 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 E5RI56 91 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 I3L1I5 382 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 SMAPO00193 183 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 CATP04040 527 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 PRR35P0CG20 571 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 MPC1LP0DKB6 136 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 ACPPP15309 386 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 VARSP26640 1264 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 RPA3P35244 121 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 TSFMP43897 325 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 EEF1A2Q05639 463 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 MFAP5Q13361 173 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 TSTA3Q13630 321 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 PCOLCEQ15113 449 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 ARMC3Q5W041 872 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 B3GNTL1Q67FW5 361 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 FAAH2Q6GMR7 532 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 IGDCC3Q8IVU1 814 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 BRIX1Q8TDN6 353 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 TAAR6Q96RI8 345 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 WDR83Q9BRX9 315 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 AARSD1Q9BTE6 412 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 TGIF2Q9GZN2 237 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 TRPC4Q9UBN4 977 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
SOX2-OT-241ENST00000626948 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 LOC102723996A0A087X1L8 192 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 CTAGE9A4FU28 777 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 H7BY64 318 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 DDAH2O95865 285 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 CARSP49589 748 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 RELAQ04206 551 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 OCA2Q04671 838 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 ZNF169Q14929 603 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 HSP90AA5PQ58FG0 334 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 RBM20Q5T481 1227 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 RNASEH2BQ5TBB1 312 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 TMEM205Q6UW68 189 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 ISLR2Q6UXK2 745 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 EEF1AKMT1Q8WVE0 214 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 FAR1Q8WVX9 515 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 TM9SF4Q92544 642 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 MMABQ96EY8 250 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 CNDP1Q96KN2 507 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 IMMP1LQ96LU5 166 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 PRAP1Q96NZ9 151 aa12.83□□□□□ -0.36
SOX2-OT-241ENST00000626948 NDNQ99608 321 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms