RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 IMPA1P29218 277 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 GRK3P35626 688 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 GRIA3P42263 894 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 UCNP55089 124 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 TMPRSS3P57727 454 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 ATP6V0D1P61421 351 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 ABATP80404 500 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 TIAL1Q01085 375 aaKnown RBP eCLIP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 IFFO1Q0D2I5 559 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 GRB7Q14451 532 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 TGIF1Q15583 401 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 TSNQ15631 228 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 FAM83EQ2M2I3 478 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 FAM153CQ494X1 144 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CRTC2Q53ET0 693 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 KIAA1614Q5VZ46 1190 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 ICE2Q659A1 982 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CAPN13Q6MZZ7 669 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 FIGLAQ6QHK4 219 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 C19orf48Q6RUI8 117 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 C6orf15Q6UXA7 325 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CYHR1Q6ZMK1 362 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CDHR3Q6ZTQ4 885 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CCDC91Q7Z6B0 441 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 VASH2Q86V25 355 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 C17orf64Q86WR6 236 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 GPSM1Q86YR5 675 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 SPATA6LQ8N4H0 392 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 EIF1ADQ8N9N8 165 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 TTC29Q8NA56 475 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 HMGCLL1Q8TB92 370 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 DENND1AQ8TEH3 1009 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 SLC44A1Q8WWI5 657 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.94□□□□□ -1.36e-17■■■■■ 148.4
NPLOC4-221ENST00000625705 MR1Q95460 341 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 SCYL1Q96KG9 808 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 SELENOSQ9BQE4 189 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 HAUS8Q9BT25 410 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 MENTQ9BUN1 341 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 NLNQ9BYT8 704 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 DERL2Q9GZP9 239 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CNOT10Q9H9A5 744 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 ACTR5Q9H9F9 607 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 NMRAL1Q9HBL8 299 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 SNX15Q9NRS6 342 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 NDOR1Q9UHB4 597 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 SRPK3Q9UPE1 567 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 OARD1Q9Y530 152 aa6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 CNOT1A5YKK6 2376 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-221ENST00000625705 A0A096LPK6 155 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 A0A0J9YVX5 310 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 IQANK1A0A1B0GTG1 560 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TEX51A0A1B0GUA7 166 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SYCE1LA8MT33 242 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TRIM49D1C9J1S8 452 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 C9J4A7 227 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 E7ENX8 843 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ZSCAN9O15535 394 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 KATNA1O75449 491 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 WDR47O94967 919 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TSPAN12O95859 305 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SNRPAP09012 282 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 HBQ1P09105 142 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ERGP11308 486 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 GFAPP14136 432 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 EZRP15311 586 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ZNF28P17035 718 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ITPKBP27987 946 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TNFRSF8P28908 595 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 DLSTP36957 453 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ARL1P40616 181 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 GLRBP48167 497 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 HNMTP50135 292 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 VSX2P58304 361 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 CXADRP78310 365 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TAP2Q03519 686 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 GRM7Q14831 915 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 UBAP2Q5T6F2 1119 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 PWWP2BQ6NUJ5 590 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TMEM207Q6UWW9 146 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 C20orf204Q6ZNR8 217 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TMPRSS11BQ86T26 416 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 MCATQ8IVS2 390 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 TCAIMQ8N3R3 496 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 Q8N3U1 123 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ZNF655Q8N720 491 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 SNX31Q8N9S9 440 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 OR2A1Q8NGT9 310 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 OR1L3Q8NH93 324 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 STAG3L4Q8TBR4 150 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 KCTD4Q8WVF5 259 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ANKRD49Q8WVL7 239 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ANKRD7Q92527 254 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 DLG3Q92796 817 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 ZUFSPQ96AP4 578 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 PYCR2Q96C36 320 aa6.93□□□□□ -1.3
NPLOC4-221ENST00000625705 FBXL8Q96CD0 374 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms