RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CKMP06732 381 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 C1SP09871 688 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 ACVR2AP27037 513 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 SNRPD1P62314 119 aaKnown RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 KCNC4Q03721 635 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 ALOXE3Q9BYJ1 711 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 HMG20AQ9NP66 347 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 PCDH12Q9NPG4 1184 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 TRNAU1APQ9NX07 287 aaKnown RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 DAPK2Q9UIK4 370 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 INSL5Q9Y5Q6 135 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 SH3BGRLO75368 114 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 OLFM2O95897 454 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 ATP1B2P14415 290 aaPredicted RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 JUPP14923 745 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 GPX2P18283 190 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 CD22P20273 847 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 CYP2A7P20853 494 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 PFN3P60673 137 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 IRF8Q02556 426 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 SRSF11Q05519 484 aaKnown RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 CBX3Q13185 183 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 CLCA4Q14CN2 919 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 TRIM16LQ309B1 348 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 PERM1Q5SV97 790 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 PDE12Q6L8Q7 609 aaKnown RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 MSANTD1Q6ZTZ1 278 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 P2RY8Q86VZ1 359 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 FIBINQ8TAL6 211 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 YIPF6Q96EC8 236 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 TPD52L3Q96J77 140 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 APOL4Q9BPW4 351 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 AKIP1Q9NQ31 210 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 KRT84Q9NSB2 600 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 NDRG4Q9ULP0 352 aaKnown RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 MYO7AQ13402 2215 aa10.91□□□□□ -0.66
VARS2-213ENST00000625423 NUP214P35658 2090 aaPredicted RBP10.91□□□□□ -0.66
VARS2-213ENST00000625423 A0A1W2PQ67 120 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 GFYI3L273 518 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 EIF3FO00303 357 aaPredicted RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 SLC22A1O15245 554 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 NADKO95544 446 aaPredicted RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 CDH3P22223 829 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 MAD2L1BPQ15013 274 aaPredicted RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 TMEM236Q5W0B7 351 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 CBLL1Q75N03 491 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 ECHDC3Q96DC8 303 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 ALPK1Q96QP1 1244 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 NEURL2Q9BR09 285 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 SIRT5Q9NXA8 310 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 BTBD3Q9Y2F9 522 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 SH3BP1Q9Y3L3 701 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 HSPE1-MOB4S4R3N1 261 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 PRRC2BQ5JSZ5 2229 aaKnown RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 NPIPB8E9PQR5 432 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 FAM20BO75063 409 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 ATP6V1G1O75348 118 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 JRKO75564 520 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 NUDT7P0C024 238 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 MPC1LP0DKB6 136 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 LAMP1P11279 417 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 GABRR2P28476 465 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 HPCAL1P37235 193 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 SPINT3P49223 89 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 CXCR4P61073 352 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 EIF3MQ7L2H7 374 aaKnown RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 CCDC71Q8IV32 467 aaPredicted RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 CMTM8Q8IZV2 173 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 PGBD3Q8N328 593 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 SH3KBP1Q96B97 665 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 VMP1Q96GC9 406 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 BRD9Q9H8M2 597 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 NECTIN3Q9NQS3 549 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 MRPL17Q9NRX2 175 aaKnown RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 THUMPD1Q9NXG2 353 aaKnown RBP10.9□□□□□ -0.66
VARS2-213ENST00000625423 VPS29Q9UBQ0 182 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 B4GALT6Q9UBX8 382 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 ERVW-1Q9UQF0 538 aa10.9□□□□□ -0.66
VARS2-213ENST00000625423 KPNA4O00629 521 aaPredicted RBP10.9□□□□□ -0.67
VARS2-213ENST00000625423 RGS10O43665 173 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 KRT20P35900 424 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 VEGFBP49765 207 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 NCS1P62166 190 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 XKR6Q5GH73 641 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 PAGE2BQ5JRK9 111 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 SYT6Q5T7P8 510 aaPredicted RBP10.9□□□□□ -0.67
VARS2-213ENST00000625423 KIAA1614Q5VZ46 1190 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 C22orf39Q6P5X5 142 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 ERICH5Q6P6B1 374 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 DPY19L3Q6ZPD9 716 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 TSPYL5Q86VY4 417 aaPredicted RBP10.9□□□□□ -0.67
VARS2-213ENST00000625423 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 ELMO1Q92556 727 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 SCAMP4Q969E2 229 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms