RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 KRTCAP2Q8N6L1 136 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 ENDOVQ8N8Q3 282 aaKnown RBP20.68■□□□□ 0.9
SPAST-204ENST00000621856 OR52E1Q8NGJ3 308 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 NUDT8Q8WV74 236 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 JADE3Q92613 823 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 TSSK3Q96PN8 268 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 GPATCH1Q9BRR8 931 aaKnown RBP20.68■□□□□ 0.9
SPAST-204ENST00000621856 EBPLQ9BY08 206 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 SPNS1Q9H2V7 528 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 PELI2Q9HAT8 420 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 TMEM181Q9P2C4 612 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 COLEC10Q9Y6Z7 277 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 KDM1AO60341 852 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 SDC1P18827 310 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 TCN1P20061 433 aaPredicted RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 PSMB5P28074 263 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 MSX2P35548 267 aaPredicted RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 CLDN8P56748 225 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 CCNIQ14094 377 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 SAMD4BQ5PRF9 694 aaKnown RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 ABRAXAS1Q6UWZ7 409 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 LINC01555Q8NAE3 123 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 HIPK4Q8NE63 616 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 CCL4L1Q8NHW4 92 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 FCRL1Q96LA6 429 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 TBC1D17Q9HA65 648 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 NMRK1Q9NWW6 199 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 PNMA8BQ9ULN7 279 aaPredicted RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 RUVBL1Q9Y265 456 aaKnown RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 LRP4O75096 1905 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 A0A1W2PPV9 198 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 NDUFS2O75306 463 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 ETHE1O95571 254 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 TNFP01375 233 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 PCSK2P16519 638 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 PXNP49023 591 aaPredicted RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 CLNS1AP54105 237 aaKnown RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 FAM174BQ3ZCQ3 159 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 WASH2PQ6VEQ5 465 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 OR2L8Q8NGY9 312 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 METTL2AQ96IZ6 378 aaKnown RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 CLMPQ9H6B4 373 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 WASH6PQ9NQA3 447 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 DMRT3Q9NQL9 472 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 TRNAU1APQ9NX07 287 aaKnown RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.67■□□□□ 0.9
SPAST-204ENST00000621856 L3MBTL1Q9Y468 752 aa20.67■□□□□ 0.9
SPAST-204ENST00000621856 PRAMEF33A0A0G2JMD5 474 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 A0A1W2PPC4 97 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 FXYD1O00168 92 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 FOXE1O00358 373 aaPredicted RBP20.66■□□□□ 0.9
SPAST-204ENST00000621856 EML2O95834 649 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 TACR1P25103 407 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 FLOT2Q14254 428 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 RBBP5Q15291 538 aaKnown RBP20.66■□□□□ 0.9
SPAST-204ENST00000621856 TMIGD1Q6UXZ0 262 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 DHDDSQ86SQ9 333 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 SYT12Q8IV01 421 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 SLC22A18ASQ8N1D0 253 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 FAM156AQ8NDB6 213 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 ZNF740Q8NDX6 193 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 SLC26A7Q8TE54 656 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 AIF1LQ9BQI0 150 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 CUEDC1Q9NWM3 386 aaPredicted RBP20.66■□□□□ 0.9
SPAST-204ENST00000621856 BCAP29Q9UHQ4 241 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 ICKQ9UPZ9 632 aa20.66■□□□□ 0.9
SPAST-204ENST00000621856 FKBP6O75344 327 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 IL6P05231 212 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 THEGLP0DJG4 465 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 CXCR2P25025 360 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 CCR8P51685 355 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 YBX1P67809 324 aaKnown RBP20.65■□□□□ 0.9
SPAST-204ENST00000621856 SPIN4Q56A73 249 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 SPANXN4Q5MJ08 99 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 FAM129CQ86XR2 697 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 C1orf52Q8N6N3 182 aaKnown RBP20.65■□□□□ 0.9
SPAST-204ENST00000621856 GPR156Q8NFN8 814 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 SLC13A3Q8WWT9 602 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 CXorf40BQ96DE9 158 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 KIR3DX1Q9H7L2 352 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 AASDHPPTQ9NRN7 309 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 SUCOQ9UBS9 1254 aaKnown RBP20.65■□□□□ 0.9
SPAST-204ENST00000621856 DGKBQ9Y6T7 804 aa20.65■□□□□ 0.9
SPAST-204ENST00000621856 FANCMQ8IYD8 2048 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 NPPAP01160 153 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 NDUFS1P28331 727 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 AP2B1P63010 937 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 ILF3Q12906 894 aaKnown RBP eCLIP20.64■□□□□ 0.9
SPAST-204ENST00000621856 ICE2Q659A1 982 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 DPP10Q8N608 796 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 PCDHB11Q9Y5F2 797 aa20.64■□□□□ 0.9
SPAST-204ENST00000621856 PRORSD1PA6NEY8 169 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 MAP3K7O43318 606 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 LRATO95237 230 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 TGFB1P01137 390 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 S100A3P33764 101 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 PIK3CBP42338 1070 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 ATXN3P54252 364 aaPredicted RBP20.64■□□□□ 0.89
SPAST-204ENST00000621856 SF1Q15637 639 aaKnown RBP20.64■□□□□ 0.89
SPAST-204ENST00000621856 AAGABQ6PD74 315 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms