RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CYP51A1Q16850 503 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 DNAL1Q4LDG9 190 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 PRAMEF17Q5VTA0 474 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 ANKRD34AQ69YU3 496 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CAPN13Q6MZZ7 669 aaPredicted RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 GATAD2AQ86YP4 633 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 ADCY4Q8NFM4 1077 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 PANX1Q96RD7 426 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 LMAN2LQ9H0V9 348 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CCDC177Q9NQR7 707 aaPredicted RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 CORO1CQ9ULV4 474 aaPredicted RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 PCDHGA7Q9Y5G6 932 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 PCM1Q15154 2024 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 SLC5A10A0PJK1 596 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 GSTA4O15217 222 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 CTSBP07858 339 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 NUDT7P0C024 238 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 PHC1P78364 1004 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 HSPB3Q12988 150 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 GK3PQ14409 553 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 SLC9A5Q14940 896 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 MLF2Q15773 248 aaPredicted RBP10.16□□□□□ -0.78
VPS11-208ENST00000621676 CACHD1Q5VU97 1274 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 LYPLAL1Q5VWZ2 237 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 KBTBD2Q8IY47 623 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 FBXL6Q8N531 539 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 Q8N9G6 341 aaPredicted RBP10.16□□□□□ -0.78
VPS11-208ENST00000621676 OR9A1PQ8NGU1 263 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 HSPA12BQ96MM6 686 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 ZNF382Q96SR6 550 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 TRMOQ9BU70 441 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 LTB4R2Q9NPC1 389 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 NDE1Q9NXR1 346 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 MAP4K5Q9Y4K4 846 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 ANKDD1BA6NHY2 528 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 FPGTO14772 594 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 THEGLP0DJG4 465 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 ANPEPP15144 967 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 RPS3P23396 243 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS11-208ENST00000621676 OXTRP30559 389 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 GTF2A1P52655 376 aaPredicted RBP10.16□□□□□ -0.78
VPS11-208ENST00000621676 TAS2R50P59544 299 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 MLLT1Q03111 559 aaPredicted RBP10.16□□□□□ -0.78
VPS11-208ENST00000621676 LIPEQ05469 1076 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 TDGQ13569 410 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 LRRC32Q14392 662 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 NKAIN2Q5VXU1 208 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 DHDDSQ86SQ9 333 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 KIAA2013Q8IYS2 634 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 HS3ST5Q8IZT8 346 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 LINC01555Q8NAE3 123 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 ATOH1Q92858 354 aaPredicted RBP10.16□□□□□ -0.78
VPS11-208ENST00000621676 LRRC58Q96CX6 371 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 DPH7Q9BTV6 452 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 SLC25A23Q9BV35 468 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 REXO4Q9GZR2 422 aaKnown RBP10.16□□□□□ -0.78
VPS11-208ENST00000621676 ACTL8Q9H568 366 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 GPR45Q9Y5Y3 372 aa10.16□□□□□ -0.78
VPS11-208ENST00000621676 STX16O14662 325 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 NDUFS2O75306 463 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 IDSP22304 550 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 S100A3P33764 101 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 RAP1GDS1P52306 607 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 MAZP56270 477 aaKnown RBP10.15□□□□□ -0.78
VPS11-208ENST00000621676 PRAMEF13Q5VWM6 474 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 ICE2Q659A1 982 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 NANOGP8Q6NSW7 305 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 C17orf64Q86WR6 236 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 SLC15A3Q8IY34 581 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 TPD52L3Q96J77 140 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 LRIG1Q96JA1 1093 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 ZBTB18Q99592 522 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 RTKNQ9BST9 563 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PHF7Q9BWX1 381 aaPredicted RBP10.15□□□□□ -0.78
VPS11-208ENST00000621676 KLHL31Q9H511 634 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 NANOGQ9H9S0 305 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 CD320Q9NPF0 282 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 NMRK1Q9NWW6 199 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 C1orf109Q9NX04 203 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 CMTM6Q9NX76 183 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 DKK3Q9UBP4 350 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 RIMKLBQ9ULI2 386 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PPIL1Q9Y3C6 166 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 SVILO95425 2214 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 OBSL1O75147 1896 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 OR6C74A6NCV1 312 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 ASPDHA6ND91 283 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 KIF1CO43896 1103 aaKnown RBP10.15□□□□□ -0.78
VPS11-208ENST00000621676 DNAJB6O75190 326 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 SLCO2B1O94956 709 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PGRP06401 933 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 C8GP07360 202 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 ACPPP15309 386 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 CD9P21926 228 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PRKACGP22612 351 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PNLIPRP1P54315 467 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 ERVK-8P63133 956 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 C2orf80Q0P641 193 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 SLC14A1Q13336 389 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms