RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 FRMPD2BQ6IN97 320 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 C16orf46Q6P387 395 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 SH2D5Q6ZV89 423 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 RNF44Q7L0R7 432 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 PLD3Q8IV08 490 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 SNX31Q8N9S9 440 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 KDF1Q8NAX2 398 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-245ENST00000621399 ZNF248Q8NDW4 579 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 ABHD11Q8NFV4 315 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 MYRIPQ8NFW9 859 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 SNIP1Q8TAD8 396 aaKnown RBP17.8■□□□□ 0.44
CIRBP-245ENST00000621399 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 SLC7A5P2Q9GIP4 190 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 TMCO1Q9UM00 188 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 IGF2RP11717 2491 aa17.8■□□□□ 0.44
CIRBP-245ENST00000621399 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-245ENST00000621399 TK2O00142 265 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 KLK8O60259 260 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 NTRK1P04629 796 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 EIF2S1P05198 315 aaKnown RBP17.79■□□□□ 0.44
CIRBP-245ENST00000621399 GRK3P35626 688 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 CCT5P48643 541 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 AGTR2P50052 363 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 VSX2P58304 361 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-245ENST00000621399 RELAQ04206 551 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 SETDB1Q15047 1291 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 PDK4Q16654 411 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 TCTE1Q5JU00 501 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 PRAMEF17Q5VTA0 474 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 LRRC70Q7Z2Q7 622 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 PROSER1Q86XN7 944 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 C4orf33Q8N1A6 199 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 UBTD2Q8WUN7 234 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 NAF1Q96HR8 494 aaKnown RBP17.79■□□□□ 0.44
CIRBP-245ENST00000621399 ZIM3Q96PE6 472 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 SPRY4Q9C004 299 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 WDR70Q9NW82 654 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 OPTCQ9UBM4 332 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 RAXQ9Y2V3 346 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 TMEM184BQ9Y519 407 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-245ENST00000621399 ASB1Q9Y576 335 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 PCDHB3Q9Y5E6 796 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 AP1M2Q9Y6Q5 423 aa17.79■□□□□ 0.44
CIRBP-245ENST00000621399 LOC105369274A0A096LPK9 316 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 LOC102723532A0A0G2JNH3 316 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 H0YGG7 62 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 COPEO14579 308 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 ZSCAN9O15535 394 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 ZNF749O43361 778 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 CPNE3O75131 537 aaKnown RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 GLRA3O75311 464 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 LIPCP11150 499 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 ARF3P61204 181 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 RPS15AP62244 130 aaKnown RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 MEF2AQ02078 507 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 WASHC2DQ5SRD0 308 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 CEP85LQ5SZL2 805 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 TLDC1Q6P9B6 456 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 NXPE4Q6UWF7 544 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 C6orf15Q6UXA7 325 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 LRIG3Q6UXM1 1119 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 TMPRSS11BQ86T26 416 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 TRABD2AQ86V40 505 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 OR4N4Q8N0Y3 316 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 TMEM151AQ8N4L1 468 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 ZNF655Q8N720 491 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 PTGR2Q8N8N7 351 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 GALNT6Q8NCL4 622 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 OR4K1Q8NGD4 311 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 KCNE4Q8WWG9 221 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 RERGQ96A58 199 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 CLIP3Q96DZ5 547 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 PHF21BQ96EK2 531 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 DCBLD2Q96PD2 775 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 OR2A5Q96R48 311 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 ACTR5Q9H9F9 607 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 PELI2Q9HAT8 420 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 STARD5Q9NSY2 213 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 GPRC5BQ9NZH0 403 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 GRID1Q9ULK0 1009 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 TNPO3Q9Y5L0 923 aaKnown RBP17.78■□□□□ 0.44
CIRBP-245ENST00000621399 ADAMTS20P59510 1910 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 USP24Q9UPU5 2620 aa17.78■□□□□ 0.44
CIRBP-245ENST00000621399 TEX51A0A1B0GUA7 166 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 FEZF1A0PJY2 475 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 H3BMH7 237 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 K7EPI3 171 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 TAF4O00268 1085 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 CLGNO14967 610 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 RGS16O15492 202 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 RRP8O43159 456 aaKnown RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 RAD1O60671 282 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 H2AFYO75367 372 aaKnown RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 DLGAP3O95886 979 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 SBK3P0C264 359 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 TAC1P20366 129 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 CRHR1P34998 444 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 EIF2S3P41091 472 aaKnown RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 SLC18A2Q05940 514 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 GRM7Q14831 915 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms