RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 B4DXG7 233 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GJB3O75712 270 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SDHBP21912 280 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 MAN2A2P49641 1150 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GZMKP49863 264 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 LRRC74AQ0VAA2 488 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GALEQ14376 348 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GPR68Q15743 365 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SPATS1Q496A3 300 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 LCN1P1Q5VSP4 162 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 BHLHB9Q6PI77 547 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 RANBP10Q6VN20 620 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 PTCHD4Q6ZW05 846 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 COMMD7Q86VX2 200 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR4L1Q8NH43 312 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZFAND1Q8TCF1 268 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 FCRL2Q96LA5 508 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SPON2Q9BUD6 331 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 C1QTNF6Q9BXI9 259 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GORASP2Q9H8Y8 452 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 DIABLOQ9NR28 239 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 LATS2Q9NRM7 1088 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 EVPLQ92817 2033 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GREB1LQ9C091 1923 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 DOCK5Q9H7D0 1870 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 PRAMEF33A0A0G2JMD5 474 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 A0A1W2PRG6 482 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 CLCA1A8K7I4 914 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 J3KR12 359 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 HBP1O60381 514 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 PRAMEF10O60809 474 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ULK1O75385 1050 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 VPS26AO75436 327 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 APOL3O95236 402 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC2A2P11168 524 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 M6PRP20645 277 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 CDH12P55289 794 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 C19orf57Q0VDD7 668 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 OTUD1Q5VV17 481 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 LIPKQ5VXJ0 399 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 C9orf57Q5W0N0 161 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ANKRD54Q6NXT1 300 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GPRIN1Q7Z2K8 1008 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GPR142Q7Z601 462 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 TAC4Q86UU9 113 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 DENND1CQ8IV53 801 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ATP6V1C2Q8NEY4 427 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZMIZ2Q8NF64 920 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR6J1Q8NGC5 347 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 EEF1AKMT1Q8WVE0 214 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 HSH2DQ96JZ2 352 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 PANX1Q96RD7 426 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SEMA3CQ99985 751 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 B3GNT4Q9C0J1 378 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 POLR2J2Q9GZM3 115 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 AGO3Q9H9G7 860 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC6A13Q9NSD5 602 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 WWOXQ9NZC7 414 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 RIMKLBQ9ULI2 386 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ING4Q9UNL4 249 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 PCDHGB2Q9Y5G2 931 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SCN1AP35498 2009 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 TRAV6A0A075B6T7 132 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 MATN3O15232 486 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC7A4O43246 635 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 KERAO60938 352 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 CNMDO75829 334 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 F9P00740 461 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 JUNDP17535 347 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 UGT2B10P36537 528 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZNF81P51508 661 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 IL2P60568 153 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 GPR19Q15760 415 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZSWIM7Q19AV6 140 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 FAM171A1Q5VUB5 890 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 LRRC66Q68CR7 880 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 MZT2BQ6NZ67 158 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ERICH5Q6P6B1 374 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 CLEC20AQ6ZU45 233 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ABI3BPQ7Z7G0 1075 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 LRRC17Q8N6Y2 441 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 KIAA1958Q8N8K9 716 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR8J3Q8NGG0 315 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 TRMT61AQ96FX7 289 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZNF419Q96HQ0 510 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ATOH8Q96SQ7 321 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 CATSPERBQ9H7T0 1116 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 MCCC2Q9HCC0 563 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 FAM8A1Q9UBU6 413 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 PIN4Q9Y237 131 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 MAN2B2Q9Y2E5 1009 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 NAALAD2Q9Y3Q0 740 aa9.49□□□□□ -0.89
TNFAIP3-210ENST00000620204 ISM1B1AKI9 464 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 SH3BP5O60239 455 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 PAGE1O75459 146 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 CCNCP24863 283 aa9.48□□□□□ -0.89
TNFAIP3-210ENST00000620204 APEX1P27695 318 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms