RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 FAM91A1Q658Y4 838 aa3□□□□□ -1.93
NEB-220ENST00000618972 ZNF709Q8N972 641 aa3□□□□□ -1.93
NEB-220ENST00000618972 MZB1Q8WU39 189 aa3□□□□□ -1.93
NEB-220ENST00000618972 KIAA1143Q96AT1 154 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 CIB1Q99828 191 aa3□□□□□ -1.93
NEB-220ENST00000618972 PRDX3P30048 256 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 GRK5P34947 590 aa3□□□□□ -1.93
NEB-220ENST00000618972 CDKN2DP55273 166 aa3□□□□□ -1.93
NEB-220ENST00000618972 KCNJ8Q15842 424 aa3□□□□□ -1.93
NEB-220ENST00000618972 CERS6Q6ZMG9 384 aa3□□□□□ -1.93
NEB-220ENST00000618972 MRPL10Q7Z7H8 261 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 RPLP0P6Q8NHW5 317 aa3□□□□□ -1.93
NEB-220ENST00000618972 SORT1Q99523 831 aa3□□□□□ -1.93
NEB-220ENST00000618972 LGR4Q9BXB1 951 aa3□□□□□ -1.93
NEB-220ENST00000618972 RIMKLBQ9ULI2 386 aa3□□□□□ -1.93
NEB-220ENST00000618972 CDK12Q9NYV4 1490 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 TCRBV5S1A1TA0A578 114 aa3□□□□□ -1.93
NEB-220ENST00000618972 URADA6NGE7 173 aa3□□□□□ -1.93
NEB-220ENST00000618972 LRCH4O75427 683 aa3□□□□□ -1.93
NEB-220ENST00000618972 PDHA2P29803 388 aa3□□□□□ -1.93
NEB-220ENST00000618972 FAM47BQ8NA70 645 aa3□□□□□ -1.93
NEB-220ENST00000618972 A0A1W2PP18 115 aa3□□□□□ -1.93
NEB-220ENST00000618972 NCF1BA6NI72 391 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 NCF1CA8MVU1 366 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 IFNA2P01563 188 aa3□□□□□ -1.93
NEB-220ENST00000618972 HLA-EP13747 358 aa3□□□□□ -1.93
NEB-220ENST00000618972 FEN1P39748 380 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 GDF5P43026 501 aa3□□□□□ -1.93
NEB-220ENST00000618972 TTPAP49638 278 aa3□□□□□ -1.93
NEB-220ENST00000618972 HOXA1P49639 335 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 TGFBIQ15582 683 aa3□□□□□ -1.93
NEB-220ENST00000618972 ZNF613Q6PF04 617 aa3□□□□□ -1.93
NEB-220ENST00000618972 TPRA1Q86W33 373 aa3□□□□□ -1.93
NEB-220ENST00000618972 EGFL8Q99944 293 aa3□□□□□ -1.93
NEB-220ENST00000618972 KAT8Q9H7Z6 458 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 C19orf12Q9NSK7 152 aa3□□□□□ -1.93
NEB-220ENST00000618972 SLC6A14Q9UN76 642 aa3□□□□□ -1.93
NEB-220ENST00000618972 HSPB11Q9Y547 144 aa3□□□□□ -1.93
NEB-220ENST00000618972 ANKARQ7Z5J8 1434 aa3□□□□□ -1.93
NEB-220ENST00000618972 H0Y858 1186 aa3□□□□□ -1.93
NEB-220ENST00000618972 RDH16O75452 317 aa3□□□□□ -1.93
NEB-220ENST00000618972 CHRNB1P11230 501 aa3□□□□□ -1.93
NEB-220ENST00000618972 IL7RP16871 459 aa3□□□□□ -1.93
NEB-220ENST00000618972 TGM4P49221 684 aa3□□□□□ -1.93
NEB-220ENST00000618972 HLCSP50747 726 aa3□□□□□ -1.93
NEB-220ENST00000618972 POLR2JP52435 117 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 PPP2R2BQ00005 443 aa3□□□□□ -1.93
NEB-220ENST00000618972 CBLBQ13191 982 aa3□□□□□ -1.93
NEB-220ENST00000618972 ZNF311Q5JNZ3 666 aa3□□□□□ -1.93
NEB-220ENST00000618972 FGD3Q5JSP0 725 aa3□□□□□ -1.93
NEB-220ENST00000618972 DCST1Q5T197 706 aa3□□□□□ -1.93
NEB-220ENST00000618972 FAM69AQ5T7M9 428 aa3□□□□□ -1.93
NEB-220ENST00000618972 RBMS3Q6XE24 437 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 RNF113BQ8IZP6 322 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 OR5J2Q8NH18 312 aa3□□□□□ -1.93
NEB-220ENST00000618972 CITED2Q99967 270 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 PRRC2BQ5JSZ5 2229 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 TRPM2O94759 1503 aa3□□□□□ -1.93
NEB-220ENST00000618972 KIF1BO60333 1816 aa3□□□□□ -1.93
NEB-220ENST00000618972 BCAS2O75934 225 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 OR6A2O95222 327 aa3□□□□□ -1.93
NEB-220ENST00000618972 CYBBP04839 570 aa3□□□□□ -1.93
NEB-220ENST00000618972 WSCD2Q2TBF2 565 aa3□□□□□ -1.93
NEB-220ENST00000618972 SNRNP25Q9BV90 132 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 VCX2Q9H322 139 aa3□□□□□ -1.93
NEB-220ENST00000618972 FKBP7Q9Y680 259 aa3□□□□□ -1.93
NEB-220ENST00000618972 I6L893 689 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 M0QYT0 321 aa3□□□□□ -1.93
NEB-220ENST00000618972 CNOT4O95628 575 aaKnown RBP3□□□□□ -1.93
NEB-220ENST00000618972 PRH1P02810 166 aa3□□□□□ -1.93
NEB-220ENST00000618972 SSX2Q16385 188 aa3□□□□□ -1.93
NEB-220ENST00000618972 P2RY8Q86VZ1 359 aa3□□□□□ -1.93
NEB-220ENST00000618972 NLGN1Q8N2Q7 840 aa3□□□□□ -1.93
NEB-220ENST00000618972 TMEM151AQ8N4L1 468 aa3□□□□□ -1.93
NEB-220ENST00000618972 SLC13A3Q8WWT9 602 aa3□□□□□ -1.93
NEB-220ENST00000618972 LRRC58Q96CX6 371 aa3□□□□□ -1.93
NEB-220ENST00000618972 PDXPQ96GD0 296 aa3□□□□□ -1.93
NEB-220ENST00000618972 PYURFQ96I23 114 aa3□□□□□ -1.93
NEB-220ENST00000618972 CSPG4P5Q96PW8 444 aa3□□□□□ -1.93
NEB-220ENST00000618972 SLC25A21Q9BQT8 299 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 ACSS3Q9H6R3 686 aa3□□□□□ -1.93
NEB-220ENST00000618972 CCM2LQ9NUG4 571 aaPredicted RBP3□□□□□ -1.93
NEB-220ENST00000618972 CACFD1Q9UGQ2 172 aa3□□□□□ -1.93
NEB-220ENST00000618972 GABRQQ9UN88 632 aa3□□□□□ -1.93
NEB-220ENST00000618972 NCAPD2Q15021 1401 aa3□□□□□ -1.93
NEB-220ENST00000618972 LRRC7Q96NW7 1537 aa3□□□□□ -1.93
NEB-220ENST00000618972 MT-ND2P03891 347 aa3□□□□□ -1.93
NEB-220ENST00000618972 OR4D2P58180 307 aa3□□□□□ -1.93
NEB-220ENST00000618972 E2F1Q01094 437 aa3□□□□□ -1.93
NEB-220ENST00000618972 SLC17A1Q14916 467 aa3□□□□□ -1.93
NEB-220ENST00000618972 SLC14A2Q15849 920 aa3□□□□□ -1.93
NEB-220ENST00000618972 SLC22A16Q86VW1 577 aa3□□□□□ -1.93
NEB-220ENST00000618972 TNFAIP8L1Q8WVP5 186 aa3□□□□□ -1.93
NEB-220ENST00000618972 HBEGFQ99075 208 aa3□□□□□ -1.93
NEB-220ENST00000618972 EDARQ9UNE0 448 aa3□□□□□ -1.93
NEB-220ENST00000618972 SMIM30A4D0T7 59 aa3□□□□□ -1.93
NEB-220ENST00000618972 INMT-MINDY4F8WBC2 141 aa3□□□□□ -1.93
NEB-220ENST00000618972 DHRS4L1P0CG22 281 aa3□□□□□ -1.93
NEB-220ENST00000618972 PGAM1P18669 254 aa3□□□□□ -1.93
NEB-220ENST00000618972 RPS7P62081 194 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms