RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 DRICH1Q6PGQ1 229 aaPredicted RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 DARS2Q6PI48 645 aaKnown RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 NAPRTQ6XQN6 538 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 CERS6Q6ZMG9 384 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 ZNF517Q6ZMY9 492 aaPredicted RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 ESPNLQ6ZVH7 1005 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 RAB11FIP2Q7L804 512 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 PEX26Q7Z412 305 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 GLT6D1Q7Z4J2 308 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 SFRP1Q8N474 314 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 FBXO39Q8N4B4 442 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 TRAM1L1Q8N609 369 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 RASGEF1AQ8N9B8 481 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 FAM71DQ8N9W8 422 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 ATL2Q8NHH9 583 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 KIAA1524Q8TCG1 905 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 KCNE4Q8WWG9 221 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 RSC1A1Q92681 617 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 USP7Q93009 1102 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 DNAJC1Q96KC8 554 aaKnown RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 PPM1MQ96MI6 270 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 CTRCQ99895 268 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 TMEM121Q9BTD3 319 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 MAGEE1Q9HCI5 957 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 APMAPQ9HDC9 416 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 SMARCAL1Q9NZC9 954 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 IL17CQ9P0M4 197 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 ZNF624Q9P2J8 865 aaPredicted RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 KLHL42Q9P2K6 505 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 LCMT1Q9UIC8 334 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 APPL1Q9UKG1 709 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 DNPEPQ9ULA0 475 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 PSMD13Q9UNM6 376 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 RPL26L1Q9UNX3 145 aaKnown RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 ZKSCAN5Q9Y2L8 839 aa4.47□□□□□ -1.69
CUL3-216ENST00000617432 CFAP20Q9Y6A4 193 aaKnown RBP4.47□□□□□ -1.69
CUL3-216ENST00000617432 ZFC3H1O60293 1989 aaKnown RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 GLYATL1P3A0A0U1RQE8 302 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 EFCAB7A8K855 629 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 HACD1B0YJ81 288 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 CHUKO15111 745 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 KIF1CO43896 1103 aaKnown RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 JMJD7P0C870 316 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 THRAP10827 490 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 ZNF7P17097 686 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 PTPN7P35236 360 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 SPAM1P38567 509 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 ARCN1P48444 511 aaKnown RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 PPM1FP49593 454 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 ZNF140P52738 457 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 NRG3P56975 720 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 PROK1P58294 105 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 XIAPP98170 497 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 MGAT5Q09328 741 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 SNX1Q13596 522 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 PEX6Q13608 980 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 NFE2L1Q14494 772 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 SIX1Q15475 284 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 SRSF7Q16629 238 aaKnown RBP eCLIP4.46□□□□□ -1.69
CUL3-216ENST00000617432 INSCQ1MX18 579 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 CCDC38Q502W7 563 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 RNF187Q5TA31 235 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 ANKS6Q68DC2 871 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 KCTD11Q693B1 232 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 IYDQ6PHW0 289 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 FBXO38Q6PIJ6 1188 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 RANBP10Q6VN20 620 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 Q6ZNX1 250 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 TRAPPC5Q8IUR0 188 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 CDKL3Q8IVW4 592 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 NDUFAF2Q8N183 169 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 LMNTD1Q8N9Z9 388 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 ZNF248Q8NDW4 579 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 OR4K2Q8NGD2 314 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 WDR36Q8NI36 951 aaKnown RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 GDAP1Q8TB36 358 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 SLC35B2Q8TB61 432 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 CCHCR1Q8TD31 782 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 C1orf54Q8WWF1 131 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 TFAP2CQ92754 450 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 HES6Q96HZ4 224 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 PDLIM2Q96JY6 352 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 ZNF578Q96N58 590 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 SPATA13Q96N96 652 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 FSD1LQ9BXM9 530 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 CARD9Q9H257 536 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 LZTFL1Q9NQ48 299 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 THSD1Q9NS62 852 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 NCKIPSDQ9NZQ3 722 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 VPS18Q9P253 973 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 NFKBIL1Q9UBC1 381 aaPredicted RBP4.46□□□□□ -1.69
CUL3-216ENST00000617432 CPNE7Q9UBL6 633 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 SLC2A6Q9UGQ3 507 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 AMFRQ9UKV5 643 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 GUCA1BQ9UMX6 200 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 PCDHGA8Q9Y5G5 932 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 PRSS21Q9Y6M0 314 aa4.46□□□□□ -1.69
CUL3-216ENST00000617432 ANKRD11Q6UB99 2663 aaPredicted RBP4.46□□□□□ -1.7
CUL3-216ENST00000617432 WIPF3A6NGB9 483 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms