RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 ZNF69Q9UC07 566 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 FBXL3Q9UKT7 428 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 EDDM13A0A1B0GTR0 161 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 TVP23AA6NH52 213 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 PRR5-ARHGAP8B1AHC4 643 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 SCO2O43819 266 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 RPP40O75818 363 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 GNAO1P09471 354 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 PRKAR1BP31321 381 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 UGT1A3P35503 534 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 SRP14P37108 136 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 TLE3Q04726 772 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 MTF1Q14872 753 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 TRAM1L1Q8N609 369 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 TEX51A0A1B0GUA7 166 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 C5orf60A6NFR6 353 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 MPZL2O60487 215 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 KLF8O95600 359 aaPredicted RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 RPS2P15880 293 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 TACR2P21452 398 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 MFSD13AQ14CX5 517 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 SEC23BQ15437 767 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 ATF6BQ99941 703 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 IL21RQ9HBE5 538 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 PCDHB14Q9Y5E9 798 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 ZNF850A8MQ14 1090 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 RPL17P18621 184 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 SSTR1P30872 391 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 CPOXP36551 454 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 SEMG2Q02383 582 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 TARDBPQ13148 414 aaKnown RBP eCLIP12.33□□□□□ -0.44
TCF4-248ENST00000616053 SHC4Q6S5L8 630 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 ISLR2Q6UXK2 745 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 OR2T27Q8NH04 317 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 SCLYQ96I15 445 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 CITED4Q96RK1 184 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 STATHP02808 62 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PTPN4P29074 926 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 KCNC1P48547 511 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 FMO1Q01740 532 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 OR2T12Q8NG77 320 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 ZBTB45Q96K62 511 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 MAPKAP1Q9BPZ7 522 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 POLLQ9UGP5 575 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 CFAP20Q9Y6A4 193 aaKnown RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 CNTN5O94779 1100 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 ECT2LQ008S8 904 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TNFAIP8L2Q6P589 184 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 PXKQ7Z7A4 578 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PLD4Q96BZ4 506 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PLEK2Q9NYT0 353 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 C11orf98E9PRG8 122 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 POU2F1P14859 743 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 NPRL3Q12980 569 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PRRT3Q5FWE3 981 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TPRG1Q6ZUI0 275 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TMPRSS7Q7RTY8 843 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 ABHD12BQ7Z5M8 362 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 KCTD4Q8WVF5 259 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TRIB2Q92519 343 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 EHD4Q9H223 541 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 DPAGT1Q9H3H5 408 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 B4GAT1O43505 415 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 FCER2P06734 321 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 RBMXP38159 391 aaKnown RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 FOLR3P41439 243 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 SLC18A2Q05940 514 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 CLEC12AQ5QGZ9 265 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 Q8N402 240 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 ANKRD52Q8NB46 1076 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 POGLUT1Q8NBL1 392 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 OR5L2Q8NGL0 311 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 DGCR14Q96DF8 476 aaKnown RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 GRHL1Q9NZI5 618 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PADI3Q9ULW8 664 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 A0A1W2PQJ5 194 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 SERTM1A2A2V5 107 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 PRICKLE3O43900 615 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 GNAZP19086 355 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 SLC2A5P22732 501 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 TGM1P22735 817 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 FOXO4P98177 505 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 CHRNEQ04844 493 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 CSTF1Q05048 431 aaKnown RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 CERS6Q6ZMG9 384 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 NET1Q7Z628 596 aaPredicted RBP12.32□□□□□ -0.44
TCF4-248ENST00000616053 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
TCF4-248ENST00000616053 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms