RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PRR23CQ6ZRP0 262 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 THAP5Q7Z6K1 395 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 OR8H2Q8N162 312 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 MCOLN3Q8TDD5 553 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 FAR1Q8WVX9 515 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 FAM162AQ96A26 154 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 AURKBQ96GD4 344 aaPredicted RBP10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 BDH2Q9BUT1 245 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 EPHX3Q9H6B9 360 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 PARVBQ9HBI1 364 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 IDH3BO43837 385 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 PRMT3O60678 531 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 NDUFS2O75306 463 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 STK16O75716 305 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ZNF682O95780 498 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 LRG1P02750 347 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 C1SP09871 688 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 OR56A5P0C7T3 313 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 EPB42P16452 691 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 HLA-FP30511 346 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 DEFB103AP81534 67 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 KCNAB2Q13303 367 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 RFTN2Q52LD8 501 aaPredicted RBP10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 RUNDC3AQ59EK9 446 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 GTF2H4Q92759 462 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 MTFMTQ96DP5 389 aaKnown RBP10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 NODALQ96S42 347 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 COPS8Q99627 209 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 TTYH2Q9BSA4 534 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 TRIT1Q9H3H1 467 aaKnown RBP10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 RNF167Q9H6Y7 350 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ZFP14Q9HCL3 533 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ADPRHL2Q9NX46 363 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SLC25A13Q9UJS0 675 aa10.54□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 BRCA2P51587 3418 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 FFAR3O14843 346 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 GPR42O15529 346 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SSX4O60224 188 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 TSC22D2O75157 780 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ERN1O75460 977 aaKnown RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 FGF18O76093 207 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CLDN9O95484 217 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ADH1AP07327 375 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 RETP07949 1114 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CLK3P49761 638 aaKnown RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 HTR6P50406 440 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CLDN8P56748 225 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 PHC1P78364 1004 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CD47Q08722 323 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ZNF773Q6PK81 442 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 AHSA2Q719I0 299 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 MCFD2Q8NI22 146 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 RAB2BQ8WUD1 216 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ZNF583Q96ND8 569 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SIRT5Q9NXA8 310 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 TMPRSS11EQ9UL52 423 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 KIF26AQ9ULI4 1882 aaPredicted RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ULK1O75385 1050 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SLCO2B1O94956 709 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 UGT2B4P06133 528 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SPNP16150 400 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 HLCSP50747 726 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ARSFP54793 590 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ADARB1P78563 741 aaKnown RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 LRRC66Q68CR7 880 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 GCNT7Q6ZNI0 430 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 PHACTR4Q8IZ21 702 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CPA6Q8N4T0 437 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 FBXO15Q8NCQ5 510 aaPredicted RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ST13P5Q8NFI4 369 aaPredicted RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 OR10A6Q8NH74 314 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SLC22A17Q8WUG5 538 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CMTM7Q96FZ5 175 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 DHRS1Q96LJ7 313 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 OSBPL10Q9BXB5 764 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 TMEM39AQ9NV64 488 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 C1orf109Q9NX04 203 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 USE1Q9NZ43 259 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 TRIM64BA6NI03 449 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 FAM220BPB1ANY3 271 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 G3V2T6 193 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 MEN1O00255 615 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 MOSPD3O75425 235 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SCELO95171 688 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 RAP2AP10114 183 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CYP2A6P11509 494 aaPredicted RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 LHCGRP22888 699 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CCR7P32248 378 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 MTAPQ13126 283 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ZNF658BQ4V348 819 aaPredicted RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 SPOUT1Q5T280 376 aaKnown RBP10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 CACHD1Q5VU97 1274 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ANKRD46Q86W74 232 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 ANKRD13BQ86YJ7 626 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 NRSN1Q8IZ57 195 aa10.53□□□□□ -0.72
SENP3-EIF4A1-201ENST00000614237 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms