RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CD22P20273 847 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 KDELR2P33947 212 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 ACSM2AQ08AH3 577 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 SYTL3Q4VX76 610 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 ACSM2BQ68CK6 577 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 ERICH5Q6P6B1 374 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 ZZZ3Q8IYH5 903 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 DDHD1Q8NEL9 900 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 GIPC3Q8TF64 312 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 PLEKHA8Q96JA3 519 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 ASPSCR1Q9BZE9 553 aa16.68■□□□□ 0.26
NEK3-206ENST00000611833 PAK1IP1Q9NWT1 392 aaPredicted RBP16.68■□□□□ 0.26
NEK3-206ENST00000611833 FAM120CQ9NX05 1096 aaKnown RBP16.68■□□□□ 0.26
NEK3-206ENST00000611833 E7EQ34 232 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 AP2A2O94973 939 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 CXCL14O95715 111 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 TFPTP0C1Z6 253 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 GPX2P18283 190 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 ITIH1P19827 911 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 NR4A1P22736 598 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 VIPR1P32241 457 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 ETV3P41162 512 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 BMXP51813 675 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 WNT3P56703 355 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 DOC2AQ14183 400 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 SF1Q15637 639 aaKnown RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 TMEM215Q68D42 235 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 BRAT1Q6PJG6 821 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 Q6ZNX1 250 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 VTCN1Q7Z7D3 282 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 CLECL1Q8IZS7 167 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 CLP1Q92989 425 aaKnown RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 TBC1D20Q96BZ9 403 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 FCRL1Q96LA6 429 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 DPH2Q9BQC3 489 aaPredicted RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 GABARAPL1Q9H0R8 117 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 RUVBL1Q9Y265 456 aaKnown RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 TMEM202A6NGA9 273 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 WASH3PC4AMC7 463 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 INMTO95050 263 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 GSTM1P09488 218 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 TYRP14679 529 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 EFNA1P20827 205 aaPredicted RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 DNAJA1P31689 397 aaKnown RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 VEGFBP49765 207 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 DAPP51397 102 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 GSTM4Q03013 218 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 ZNF33BQ06732 778 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 NAE1Q13564 534 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 TBC1D25Q3MII6 688 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 SMYD1Q8NB12 490 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 OR8J2Q8NGG1 315 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 WDR20Q8TBZ3 569 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 LINC00597Q9H2U6 94 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 PDP1Q9P0J1 537 aaPredicted RBP16.67■□□□□ 0.26
NEK3-206ENST00000611833 FBXO10Q9UK96 956 aa16.67■□□□□ 0.26
NEK3-206ENST00000611833 ARHGEF33A8MVX0 844 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 ZNF99A8MXY4 864 aaPredicted RBP16.66■□□□□ 0.26
NEK3-206ENST00000611833 SCN2BO60939 215 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 XYLBO75191 536 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 NDUFS2O75306 463 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 SH3BGRLO75368 114 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 DNAJB5O75953 348 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 CLPXO76031 633 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 SLCO2B1O94956 709 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 ZBTB11O95625 1053 aaPredicted RBP16.66■□□□□ 0.26
NEK3-206ENST00000611833 ADH1AP07327 375 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 ACRP10323 421 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 LAMP1P11279 417 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 HTR1BP28222 390 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 GALNT18Q6P9A2 607 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 AGTRAPQ6RW13 159 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 RASGRP3Q8IV61 690 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 RAVER1Q8IY67 606 aaKnown RBP16.66■□□□□ 0.26
NEK3-206ENST00000611833 PGBD3Q8N328 593 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 SNRNP27Q8WVK2 155 aaKnown RBP16.66■□□□□ 0.26
NEK3-206ENST00000611833 ATL1Q8WXF7 558 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 SORCS1Q8WY21 1168 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 IRF7Q92985 503 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 FKBP10Q96AY3 582 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 TMEM159Q96B96 161 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 HSH2DQ96JZ2 352 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 RIOK2Q9BVS4 552 aaKnown RBP16.66■□□□□ 0.26
NEK3-206ENST00000611833 SGK2Q9HBY8 427 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 KIF17Q9P2E2 1029 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 SAMHD1Q9Y3Z3 626 aaKnown RBP16.66■□□□□ 0.26
NEK3-206ENST00000611833 GMPPBQ9Y5P6 360 aa16.66■□□□□ 0.26
NEK3-206ENST00000611833 FADS2P1A8MWK0 482 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 BCAS1O75363 584 aaPredicted RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 LEFTY1O75610 366 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 CLTBP09497 229 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 LINC00271P0C7V0 271 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 FPR1P21462 350 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 PCMT1P22061 227 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 FMO3P31513 532 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 VLDLRP98155 873 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 TEAD2Q15562 447 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 C1orf53Q5VUE5 145 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 PTOV1Q86YD1 416 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms