RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MEP1AQ16819 746 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HKDC1Q2TB90 917 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANKRD20A2Q5SQ80 823 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MFSD4BQ5TF39 518 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANKRD20A1Q5TYW2 823 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANKRD20A3Q5VUR7 823 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR2A1Q8NGT9 310 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LILRB4Q8NHJ6 448 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LKAAEAR1Q8TD35 194 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NPAS2Q99743 824 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 BPIFA3Q9BQP9 254 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HEMGNQ9BXL5 484 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 VN1R1Q9GZP7 353 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SYNPO2LQ9H987 977 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KCNK13Q9HB14 408 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KCNJ16Q9NPI9 418 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 DNAJB12Q9NXW2 375 aaKnown RBP11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RNF6Q9Y252 685 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 AKAP6Q13023 2319 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MACROD2A1Z1Q3 448 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CCDC162PA2VCL2 907 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PSTPIP1O43586 416 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 VPS26AO75436 327 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GPC4O75487 556 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 STK10O94804 968 aaKnown RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 APOA4P06727 396 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HOXD4P09016 255 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FOXN2P32314 431 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PTGS2P35354 604 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MINDY4Q4G0A6 757 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CCSMST1Q4G0I0 132 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC25A25Q6KCM7 469 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 H3F3CQ6NXT2 135 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FBXO42Q6P3S6 717 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TTC23LQ6PF05 361 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 BBS12Q6ZW61 710 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 Q71RC1 249 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CPEB2Q7Z5Q1 589 aaKnown RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CDKL3Q8IVW4 592 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RHOT2Q8IXI1 618 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RAB42Q8N4Z0 105 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HORMAD2Q8N7B1 307 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ASZ1Q8WWH4 475 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HDAC10Q969S8 669 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ALS2CR12Q96Q35 445 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANP32EQ9BTT0 268 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 DPH7Q9BTV6 452 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ACAT2Q9BWD1 397 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 DRC3Q9H069 523 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LIME1Q9H400 295 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PIH1D1Q9NWS0 290 aaKnown RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ST6GALNAC2Q9UJ37 374 aa11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RUVBL2Q9Y230 463 aaKnown RBP11.11□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANKRD12Q6UB98 2062 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CCDC88CQ9P219 2028 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 A0A0U1RQJ8 604 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 A0A1B0GTH9 108 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 A0A1W2PPV9 198 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 IQCF5A8MTL0 148 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 F8W8V4 182 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 APOC4-APOC2K7ER74 178 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FOXS1O43638 330 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NME2P1O60361 137 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC25A12O75746 678 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 APOC2P02655 101 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NME2P22392 152 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MARCKSL1P49006 195 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NAA25Q14CX7 972 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TMED2Q15363 201 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MAPKAPK3Q16644 382 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CCDC181Q5TID7 509 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GARNL3Q5VVW2 1013 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LRRC8BQ6P9F7 803 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KATNAL2Q8IYT4 538 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC5A8Q8N695 610 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 STYXQ8WUJ0 223 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SKA2Q8WVK7 121 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RAD51AP1Q96B01 352 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 IQCDQ96DY2 449 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SPATA13Q96N96 652 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PPP1R2P1Q96PQ5 205 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CYTH2Q99418 400 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OLFM1Q99784 485 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SMR3AQ99954 134 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 POLDIP3Q9BY77 421 aaKnown RBP11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LRFN1Q9P244 771 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 C19orf25Q9UFG5 118 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PLEKHA6Q9Y2H5 1048 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms