RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 PAQR7Q86WK9 346 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 CATSPER1Q8NEC5 780 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 NR4A3Q92570 626 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 C10orf90Q96M02 699 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 OR2A5Q96R48 311 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 TUBB6Q9BUF5 446 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 YIPF2Q9BWQ6 316 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 DRC3Q9H069 523 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 ZNF700Q9H0M5 742 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 INTS10Q9NVR2 710 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 PTGFRNQ9P2B2 879 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 SUCOQ9UBS9 1254 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 KLF2Q9Y5W3 355 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 CDK2AP1O14519 115 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 UQCRHP07919 91 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ZSCAN5DPP0CG00 497 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ENO3P13929 434 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 AVPR1BP47901 424 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 PNLIPRP1P54315 467 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 FASTKQ14296 549 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 LONRF1Q17RB8 773 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ICE2Q659A1 982 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ZNF425Q6IV72 752 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 TMEM205Q6UW68 189 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 LAPTM4BQ86VI4 370 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 LMNTD2Q8IXW0 634 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 PRSS58Q8IYP2 241 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 MCOLN3Q8TDD5 553 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 BRIX1Q8TDN6 353 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 METTL21AQ8WXB1 218 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 MARVELD3Q96A59 401 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 C8orf44Q96CB5 159 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 MFSD3Q96ES6 412 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 MMABQ96EY8 250 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 DESI2Q9BSY9 194 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ACAT2Q9BWD1 397 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 FAM129AQ9BZQ8 928 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 UNKQ9C0B0 810 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ABI3Q9P2A4 366 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 COPG2Q9UBF2 871 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 ZGRF1Q86YA3 2104 aa16.93■□□□□ 0.3
SHKBP1-227ENST00000602011 H0YIG0 161 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 ZBTB14O43829 449 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 ZG16O60844 167 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 MED26O95402 600 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 ARNTP27540 789 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 CDC25BP30305 580 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 CRADDP78560 199 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 RBPJQ06330 500 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 KLHL38Q2WGJ6 581 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 ABHD17BQ5VST6 288 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 NEPROQ6NW34 567 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 CILP2Q8IUL8 1156 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 THAP11Q96EK4 314 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 MAGEB10Q96LZ2 347 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 RBSNQ9H1K0 784 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 C19orf25Q9UFG5 118 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 PCDHGB6Q9Y5F9 930 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 COMMD10Q9Y6G5 202 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 OTOGQ6ZRI0 2925 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 APCP25054 2843 aa16.92■□□□□ 0.3
SHKBP1-227ENST00000602011 NUP210LQ5VU65 1888 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 KCNE1BA0A087WTH5 132 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 ARHGEF33A8MVX0 844 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 EIF3FO00303 357 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 NIPSNAP2O75323 286 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 RASAL1O95294 804 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 MLYCDO95822 493 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 MPC1LP0DKB6 136 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 MGAT1P26572 445 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 SIX1Q15475 284 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 SUSD1Q6UWL2 747 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 PRUNE1Q86TP1 453 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 ASB11Q8WXH4 323 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 PHF12Q96QT6 1004 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 MESP1Q9BRJ9 268 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 PCBD2Q9H0N5 130 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 CCDC68Q9H2F9 335 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 CHST11Q9NPF2 352 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 TMEM184CQ9NVA4 438 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 STMN3Q9NZ72 180 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 SAMD15Q9P1V8 674 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 RUVBL2Q9Y230 463 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 CRYL1Q9Y2S2 319 aa16.91■□□□□ 0.3
SHKBP1-227ENST00000602011 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 E7ENX8 843 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 GFYI3L273 518 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 C8orf89P0DMQ9 161 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 MLNP12872 115 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 IL10P22301 178 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 ELAVL4P26378 380 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 MAGEA6P43360 314 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 TDGF1P3P51864 188 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 CASP6P55212 293 aa16.9■□□□□ 0.3
SHKBP1-227ENST00000602011 TAP2Q03519 686 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms