RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
ARHGEF1-222ENST00000600517 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
ARHGEF1-222ENST00000600517 NDOR1Q9UHB4 597 aa12.87□□□□□ -0.35
ARHGEF1-222ENST00000600517 MAN2B2Q9Y2E5 1009 aa12.87□□□□□ -0.35
ARHGEF1-222ENST00000600517 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
ARHGEF1-222ENST00000600517 SNRNP200O75643 2136 aaKnown RBP12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 B8ZZF3 427 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 CDC7O00311 574 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 WISP3O95389 354 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 MED26O95402 600 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 STX2P32856 288 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 SPRP35270 261 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 PMS2P54278 862 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 CSNK1G2P78368 415 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 SSPNQ14714 243 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 GRTP1Q5TC63 336 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 CAPN13Q6MZZ7 669 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 LCTLQ6UWM7 567 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 RELL1Q8IUW5 271 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 OR2Y1Q8NGV0 311 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 FKBP10Q96AY3 582 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 PTERQ96BW5 349 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 TSPAN17Q96FV3 270 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 ABHD17AQ96GS6 310 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 GPR22Q99680 433 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 HAUS8Q9BT25 410 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 FAM129AQ9BZQ8 928 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 SLC26A1Q9H2B4 701 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 CAB39LQ9H9S4 337 aa12.86□□□□□ -0.35
ARHGEF1-222ENST00000600517 HELZ2Q9BYK8 2649 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 TXNDC9O14530 226 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 HAT1O14929 419 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 GUCA1CO95843 209 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 FOLR3P41439 243 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 CDKL1Q00532 357 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 NAB1Q13506 487 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 USP10Q14694 798 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 SLC9A5Q14940 896 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 ZKSCAN8Q15776 578 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 MUM1Q2TAK8 710 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 PRMT9Q6P2P2 845 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 CEP128Q6ZU80 1094 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 ADCK2Q7Z695 626 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 C17orf64Q86WR6 236 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 CSNK1A1LQ8N752 337 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 ABHD11Q8NFV4 315 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 RERGQ96A58 199 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 PYCR2Q96C36 320 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 C10orf90Q96M02 699 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 IP6K3Q96PC2 410 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 DERL2Q9GZP9 239 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 WDR54Q9H977 334 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 CTNNAL1Q9UBT7 734 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 RUVBL1Q9Y265 456 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 OARD1Q9Y530 152 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 GCN1Q92616 2671 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 COL6A6A6NMZ7 2263 aa12.85□□□□□ -0.35
ARHGEF1-222ENST00000600517 NPEPPSL1A6NEC2 478 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 RFPL1O75677 317 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 FAM155BO75949 473 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 UMODP07911 640 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 CCDC166P0CW27 439 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 STMN1P16949 149 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 OR1D4P47884 311 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 TSNQ15631 228 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 HKDC1Q2TB90 917 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 ZNF605Q86T29 641 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 ADAMTSL2Q86TH1 951 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 RAB43Q86YS6 212 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 ARHGEF39Q8N4T4 335 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 OR4K1Q8NGD4 311 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 C9orf43Q8TAL5 461 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 IFT81Q8WYA0 676 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 NACC2Q96BF6 587 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 MVB12AQ96EY5 273 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 UBXN10Q96LJ8 280 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 OR4K3Q96R72 315 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 TRIM55Q9BYV6 548 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 ING2Q9H160 280 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 MTRF1LQ9UGC7 380 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 TLK1Q9UKI8 766 aa12.84□□□□□ -0.35
ARHGEF1-222ENST00000600517 CDC14AQ9UNH5 594 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms