RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 MBOAT1Q6ZNC8 495 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 SYVN1Q86TM6 617 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 ZNF655Q8N720 491 aaPredicted RBP15.48■□□□□ 0.07
LSM4-206ENST00000600289 CLEC18CQ8NCF0 446 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 OR56A3Q8NH54 315 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 IFT81Q8WYA0 676 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 UBXN10Q96LJ8 280 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 CYTH2Q99418 400 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 NDC1Q9BTX1 674 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 DHRS4Q9BTZ2 278 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 CDC42EP4Q9H3Q1 356 aaKnown RBP15.48■□□□□ 0.07
LSM4-206ENST00000600289 ACTL8Q9H568 366 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 OARD1Q9Y530 152 aa15.48■□□□□ 0.07
LSM4-206ENST00000600289 MRPS18BQ9Y676 258 aaKnown RBP15.48■□□□□ 0.07
LSM4-206ENST00000600289 NKX2-8O15522 239 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 NRP2O60462 931 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 CD63P08962 238 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 FBN2P35556 2912 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 SLC26A3P40879 764 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 RAB10P61026 200 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 ATP6V0D1P61421 351 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 EFTUD2Q15029 972 aaKnown RBP eCLIP15.47■□□□□ 0.072e-11■■■■■ 29.6
LSM4-206ENST00000600289 NCF4Q15080 339 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 LINC00303Q3SY05 128 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 C4orf17Q53FE4 359 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 THEMIS2Q5TEJ8 643 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 FRMPD2BQ6IN97 320 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 LCN10Q6JVE6 187 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 CAPN13Q6MZZ7 669 aaPredicted RBP15.47■□□□□ 0.07
LSM4-206ENST00000600289 FBXO42Q6P3S6 717 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 CCDC91Q7Z6B0 441 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 IFT20Q8IY31 132 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 KLHDC8AQ8IYD2 350 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 TTC29Q8NA56 475 aaPredicted RBP15.47■□□□□ 0.07
LSM4-206ENST00000600289 HAUS8Q9BT25 410 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 CAB39LQ9H9S4 337 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 TXLNGQ9NUQ3 528 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 TMEM184CQ9NVA4 438 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 CCDC88CQ9P219 2028 aa15.47■□□□□ 0.07
LSM4-206ENST00000600289 FARSAQ9Y285 508 aaKnown RBP15.47■□□□□ 0.07
LSM4-206ENST00000600289 A0A0J9YVX5 310 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 A0A1B0GX78 115 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 NPEPPSL1A6NEC2 478 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 ENO4A6NNW6 628 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 C9J4A7 227 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CDC7O00311 574 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 DSCR3O14972 297 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CD1DP15813 335 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 HNMTP50135 292 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CYP4F2P78329 520 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 DCDP81605 110 aaKnown RBP15.46■□□□□ 0.07
LSM4-206ENST00000600289 NAE1Q13564 534 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 TSTA3Q13630 321 aaPredicted RBP15.46■□□□□ 0.07
LSM4-206ENST00000600289 SLMAPQ14BN4 828 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 TBR1Q16650 682 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 UGT8Q16880 541 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 PRTGQ2VWP7 1150 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 FAM214AQ32MH5 1076 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CDKL4Q5MAI5 379 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 WASHC2DQ5SRD0 308 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 BORAQ6PGQ7 559 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 EIF1ADQ8N9N8 165 aaKnown RBP15.46■□□□□ 0.07
LSM4-206ENST00000600289 OR2A5Q96R48 311 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 RUFY1Q96T51 708 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 ATG10Q9H0Y0 220 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CUTCQ9NTM9 273 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CUEDC1Q9NWM3 386 aaPredicted RBP15.46■□□□□ 0.07
LSM4-206ENST00000600289 IRAK4Q9NWZ3 460 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 CTNNAL1Q9UBT7 734 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 ABCA12Q86UK0 2595 aa15.46■□□□□ 0.07
LSM4-206ENST00000600289 SEC16AO15027 2179 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 ICE1Q9Y2F5 2266 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 KCNE1BA0A087WTH5 132 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 TXNDC9O14530 226 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 PHGDHO43175 533 aaKnown RBP15.45■□□□□ 0.06
LSM4-206ENST00000600289 KATNA1O75449 491 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 FAM155BO75949 473 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 ANXA5P08758 320 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 SLC35E2BP0CK96 405 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 CCDC166P0CW27 439 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 NPPBP16860 134 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 CRABP2P29373 138 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 CCR10P46092 362 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 VSX2P58304 361 aaPredicted RBP15.45■□□□□ 0.06
LSM4-206ENST00000600289 TSNQ15631 228 aaKnown RBP15.45■□□□□ 0.06
LSM4-206ENST00000600289 PTCHD3Q3KNS1 767 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 MRPL14Q6P1L8 145 aaKnown RBP15.45■□□□□ 0.06
LSM4-206ENST00000600289 C17orf64Q86WR6 236 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 ENDOVQ8N8Q3 282 aaKnown RBP15.45■□□□□ 0.06
LSM4-206ENST00000600289 ABHD11Q8NFV4 315 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 FKBP10Q96AY3 582 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 THAP11Q96EK4 314 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 SARGQ9BW04 601 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 SYNPO2LQ9H987 977 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 DHCR7Q9UBM7 475 aaKnown RBP15.45■□□□□ 0.06
LSM4-206ENST00000600289 TCFL5Q9UL49 500 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 PADI2Q9Y2J8 665 aa15.45■□□□□ 0.06
LSM4-206ENST00000600289 SPTBN1Q01082 2364 aaKnown RBP15.44■□□□□ 0.06
LSM4-206ENST00000600289 LOC105369274A0A096LPK9 316 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 LOC102723532A0A0G2JNH3 316 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms