RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CENPUQ71F23 418 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 ZC3H7AQ8IWR0 971 aaKnown RBP13.95□□□□□ -0.18
IRF3-223ENST00000599223 RAB42Q8N4Z0 105 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 SIRT6Q8N6T7 355 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 CEP112Q8N8E3 955 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 MYRIPQ8NFW9 859 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 OR9A1PQ8NGU1 263 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 FOPNLQ96NB1 174 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 PKP4Q99569 1192 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 L2HGDHQ9H9P8 463 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 MRPS30Q9NP92 439 aaKnown RBP13.95□□□□□ -0.18
IRF3-223ENST00000599223 OLAHQ9NV23 265 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 TRPC4Q9UBN4 977 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 TAC3Q9UHF0 121 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 SOX13Q9UN79 622 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 MED16Q9Y2X0 877 aa13.95□□□□□ -0.18
IRF3-223ENST00000599223 MRPS2Q9Y399 296 aaKnown RBP13.95□□□□□ -0.18
IRF3-223ENST00000599223 IGHV1-45A0A0A0MS14 117 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 NSG1A0A0A6YYJ2 146 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 FOXS1O43638 330 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 SLC16A8O95907 504 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 ESR1P03372 595 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 TCP1P17987 556 aaKnown RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 TPSB2P20231 275 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 TNFSF10P50591 281 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 ARG2P78540 354 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 MAT1AQ00266 395 aaKnown RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 CUL1Q13616 776 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 TSTA3Q13630 321 aaPredicted RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 PCOLCEQ15113 449 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 TPSAB1Q15661 275 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 ZRSR2Q15696 482 aaKnown RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 KLHL38Q2WGJ6 581 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 RNF187Q5TA31 235 aaPredicted RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 ANKRD22Q5VYY1 191 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 ICE2Q659A1 982 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 KIAA0930Q6ICG6 404 aaPredicted RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 MRNIPQ6NTE8 343 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 FJX1Q86VR8 437 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 PLD3Q8IV08 490 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 KBTBD2Q8IY47 623 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 OR1N1Q8NGS0 311 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 SMPDL3AQ92484 453 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 MAGEB10Q96LZ2 347 aaPredicted RBP13.94□□□□□ -0.18
IRF3-223ENST00000599223 OR2A5Q96R48 311 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 LMF1Q96S06 567 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 BFARQ9NZS9 450 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 MRFAP1Q9Y605 127 aa13.94□□□□□ -0.18
IRF3-223ENST00000599223 SCN3AQ9NY46 2000 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 A0A0A6YYC8 382 aaPredicted RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 I3L1I5 382 aaPredicted RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 PCDH17O14917 1159 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 HAT1O14929 419 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 USP1O94782 785 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 FGGP02679 453 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 STSP08842 583 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 ITGAMP11215 1152 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 OGNP20774 298 aaKnown RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 RPA3P35244 121 aaPredicted RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 SLC26A3P40879 764 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 NPY2RP49146 381 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 VPS41P49754 854 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 CLCN7P51798 805 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 PNLIPRP1P54315 467 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 EMP2P54851 167 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 EMP3P54852 163 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 TRIP13Q15645 432 aaPredicted RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 ANKRD20A4Q4UJ75 823 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 RPUSD3Q6P087 351 aaKnown RBP13.93□□□□□ -0.18
IRF3-223ENST00000599223 LRRC8BQ6P9F7 803 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 NDUFAF7Q7L592 441 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 CILP2Q8IUL8 1156 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 BCORP1Q8N888 145 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 MAGEC3Q8TD91 643 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 ZNF480Q8WV37 535 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 PCNX1Q96RV3 2341 aa13.93□□□□□ -0.18
IRF3-223ENST00000599223 DCHS2Q6V1P9 2916 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 LOC102723996A0A087X1L8 192 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 ARHGAP10A1A4S6 786 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 E7ENX8 843 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 VPS26AO75436 327 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 JRKO75564 520 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 SERPINA7P05543 415 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 PKMP14618 531 aaKnown RBP13.92□□□□□ -0.18
IRF3-223ENST00000599223 EZRP15311 586 aaKnown RBP13.92□□□□□ -0.18
IRF3-223ENST00000599223 CHRM3P20309 590 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 TNFRSF8P28908 595 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 TAP2Q03519 686 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 ZNF470Q6ECI4 717 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 ZNF549Q6P9A3 640 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 GSTA5Q7RTV2 222 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 PRSS41Q7RTY9 318 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 CAND1Q86VP6 1230 aaKnown RBP13.92□□□□□ -0.18
IRF3-223ENST00000599223 DENND6AQ8IWF6 608 aa13.92□□□□□ -0.18
IRF3-223ENST00000599223 LRRC56Q8IYG6 542 aaPredicted RBP13.92□□□□□ -0.18
IRF3-223ENST00000599223 AGGF1Q8N302 714 aaeCLIP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms