RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 A0A1B0GX78 115 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 HYKKA2RU49 373 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 DSCR3O14972 297 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 RECKO95980 971 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 ANXA5P08758 320 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 CD1DP15813 335 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 NPPBP16860 134 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 GMPRP36959 345 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 ATP6V0D1P61421 351 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 DCDP81605 110 aaKnown RBP13.24□□□□□ -0.29
UPF1-205ENST00000598209 NFKB2Q00653 900 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 RELAQ04206 551 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 BMPR2Q13873 1038 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 CSHL1Q14406 222 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 NCF4Q15080 339 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 FAM214AQ32MH5 1076 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 MROH9Q5TGP6 573 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 RAPH1Q70E73 1250 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 SYVN1Q86TM6 617 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 LSM14AQ8ND56 463 aaKnown RBP13.24□□□□□ -0.29
UPF1-205ENST00000598209 WBP1Q96G27 269 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 UBXN10Q96LJ8 280 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 OR2A5Q96R48 311 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 SYNPO2LQ9H987 977 aa13.24□□□□□ -0.29
UPF1-205ENST00000598209 GPN3Q9UHW5 284 aaPredicted RBP13.24□□□□□ -0.29
UPF1-205ENST00000598209 IGSF10Q6WRI0 2623 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 HMX2A2RU54 273 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 CDC14CA4D256 554 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 FURINP09958 794 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 SLC35E2BP0CK96 405 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 CDH1P12830 882 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 CRABP2P29373 138 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 CSNK1G2P78368 415 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 SLC9A5Q14940 896 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 TGFBIQ15582 683 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 OR4D1Q15615 310 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 PRTGQ2VWP7 1150 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 DEFB109BQ30KR1 87 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 NKAIN1Q4KMZ8 207 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 TEX35Q5T0J7 233 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 FAM69BQ5VUD6 431 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 MLIPQ5VWP3 458 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 GPSM1Q86YR5 675 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 CSNK1A1LQ8N752 337 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
UPF1-205ENST00000598209 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 RERGQ96A58 199 aaPredicted RBP13.23□□□□□ -0.29
UPF1-205ENST00000598209 PTERQ96BW5 349 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 ARHGAP9Q9BRR9 750 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 DHRS4Q9BTZ2 278 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
UPF1-205ENST00000598209 TCFL5Q9UL49 500 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 POLHQ9Y253 713 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 PADI2Q9Y2J8 665 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
UPF1-205ENST00000598209 A0A087WUV0 522 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 NCF1BA6NI72 391 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 NCF1CA8MVU1 366 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 MED26O95402 600 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 INHBAP08476 426 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 NCF1P14598 390 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 ITGAXP20702 1163 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 HNMTP50135 292 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 RPS15AP62244 130 aaKnown RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 DLG1Q12959 904 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 IL10RAQ13651 578 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 LY6DQ14210 128 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 UGT8Q16880 541 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 MUM1Q2TAK8 710 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 HKDC1Q2TB90 917 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 TBC1D1Q86TI0 1168 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 THOC6Q86W42 341 aaKnown RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 DTWD1Q8N5C7 304 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 METTL27Q8N6F8 245 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 KIAA1191Q96A73 305 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 RHBDF1Q96CC6 855 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 CABS1Q96KC9 395 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 C10orf90Q96M02 699 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 SLC22A11Q9NSA0 550 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 RUVBL1Q9Y265 456 aaKnown RBP13.22□□□□□ -0.29
UPF1-205ENST00000598209 ACOT9Q9Y305 439 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 IKBKGQ9Y6K9 419 aa13.22□□□□□ -0.29
UPF1-205ENST00000598209 ATMQ13315 3056 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 MED13Q9UHV7 2174 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 NUP210LQ5VU65 1888 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 A0A087X1B8 175 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 FEZF1A0PJY2 475 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 TK2O00142 265 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 TXNDC9O14530 226 aa13.21□□□□□ -0.29
UPF1-205ENST00000598209 P2RX6O15547 441 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms