RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	PCYOX1	Q9UHG3	505 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	CDC14A	Q9UNH5	594 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ZKSCAN5	Q9Y2L8	839 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	IGHV1-45	A0A0A0MS14	117 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	SMAP	O00193	183 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	HAT1	O14929	419 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	PFDN6	O15212	129 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	FOXS1	O43638	330 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	CEP104	O60308	925 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	SYF2	O95926	243 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	CAT	P04040	527 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	SERPINA7	P05543	415 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	HEXB	P07686	556 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	UQCRH	P07919	91 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ANXA5	P08758	320 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	EZR	P15311	586 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	SOX11	P35716	441 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	SLC26A3	P40879	764 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	CLCN7	P51798	805 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	EMP3	P54852	163 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ADAR	P55265	1226 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	KCNK10	P57789	538 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	MAT1A	Q00266	395 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	SRSF11	Q05519	484 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	PRDX1	Q06830	199 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	GPS1	Q13098	491 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ARHGAP19	Q14CB8	494 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	C1QL3	Q5VWW1	255 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF470	Q6ECI4	717 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	NEPRO	Q6NW34	567 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ADCK2	Q7Z695	626 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	CAND1	Q86VP6	1230 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	FJX1	Q86VR8	437 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	DENND6A	Q8IWF6	608 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ZC3H7A	Q8IWR0	971 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	SHISA5	Q8N114	240 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	BCORP1	Q8N888	145 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	PRELID2	Q8N945	189 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF480	Q8WV37	535 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	RERG	Q96A58	199 aa	Predicted RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF669	Q96BR6	464 aa	Predicted RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	MVB12A	Q96EY5	273 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	OR2A5	Q96R48	311 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	TAAR6	Q96RI8	345 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	DRC3	Q9H069	523 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	FBXO6	Q9NRD1	293 aa	Predicted RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	C14orf105	Q9NVL8	296 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	MED16	Q9Y2X0	877 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	MRPS2	Q9Y399	296 aa	Known RBP	10	□□□□□ -0.81
LSM4-205	ENST00000597776	CNTRL	Q7Z7A1	2325 aa		10	□□□□□ -0.81
LSM4-205	ENST00000597776	CSMD1	Q96PZ7	3565 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776		A0A1W2PQ72	361 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	DYTN	A2CJ06	578 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	CTAGE9	A4FU28	777 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776		E7ENX8	843 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	GOLGA8M	H3BSY2	632 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	PRPF4	O43172	522 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	PHF2	O75151	1096 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	JRK	O75564	520 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	CCNDBP1	O95273	360 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	BMP10	O95393	424 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	STS	P08842	583 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	ITGAM	P11215	1152 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	PAM	P19021	973 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	CXCR2	P25025	360 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	TNFSF10	P50591	281 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	TDGF1P3	P51864	188 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	PER3	P56645	1201 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	TAP2	Q03519	686 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	CTBP1	Q13363	440 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	DHX34	Q14147	1143 aa	Known RBP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	PCOLCE	Q15113	449 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	ZRSR2	Q15696	482 aa	Known RBP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF324B	Q6AW86	544 aa	Predicted RBP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	RPUSD3	Q6P087	351 aa	Known RBP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	TTC27	Q6P3X3	843 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF549	Q6P9A3	640 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	PRSS41	Q7RTY9	318 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	OR9A4	Q8NGU2	314 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	MAIP1	Q8WWC4	291 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	MKKS	Q9NPJ1	570 aa	Predicted RBP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	RIC8B	Q9NVN3	520 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	INTS10	Q9NVR2	710 aa	Known RBP	9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	SAMD15	Q9P1V8	674 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	MKL2	Q9ULH7	1088 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	CREBBP	Q92793	2442 aa		9.99	□□□□□ -0.81
LSM4-205	ENST00000597776	SVIL	O95425	2214 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	DIDO1	Q9BTC0	2240 aa	Known RBP	9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	LOC102723996	A0A087X1L8	192 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	TRAV17	A0A0B4J275	112 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	IGHV3-20	A0A0C4DH32	117 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	ARHGAP10	A1A4S6	786 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF839	A8K0R7	811 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776		H7BY64	318 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	PCDH17	O14917	1159 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	KIF5C	O60282	957 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	WFS1	O76024	890 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	WDPCP	O95876	746 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	PRF1	P14222	555 aa		9.98	□□□□□ -0.81
LSM4-205	ENST00000597776	FDXR	P22570	491 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms