RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CALML6Q8TD86 181 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 MAGEC3Q8TD91 643 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 TM9SF4Q92544 642 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 PWWP2AQ96N64 755 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 SLC30A3Q99726 388 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 FAM167BQ9BTA0 163 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 DPH7Q9BTV6 452 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 RAB17Q9H0T7 212 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 ZNF304Q9HCX3 659 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 C20orf96Q9NUD7 363 aaPredicted RBP14.46□□□□□ -0.09
TGFB1-202ENST00000597453 NXT1Q9UKK6 140 aaKnown RBP14.46□□□□□ -0.09
TGFB1-202ENST00000597453 UTP11Q9Y3A2 253 aaKnown RBP14.46□□□□□ -0.09
TGFB1-202ENST00000597453 PCDHGA10Q9Y5H3 936 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 CENPEQ02224 2701 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 SVILO95425 2214 aa14.46□□□□□ -0.1
TGFB1-202ENST00000597453 IGKV1-8A0A0C4DH67 115 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 E7ESA3 106 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 MYO1CO00159 1063 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 PSIP1O75475 530 aaKnown RBP14.45□□□□□ -0.1
TGFB1-202ENST00000597453 CMPK1P30085 196 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 CLCN7P51798 805 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 KLC1Q07866 573 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 Q0VFX4 171 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 CBLBQ13191 982 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 TUBB8Q3ZCM7 444 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 KCNMB4Q86W47 210 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 IGDCC3Q8IVU1 814 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 PRSS58Q8IYP2 241 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 KIF18AQ8NI77 898 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 STT3BQ8TCJ2 826 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 PKP4Q99569 1192 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 ZFYVE21Q9BQ24 234 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 WDR77Q9BQA1 342 aaPredicted RBP14.45□□□□□ -0.1
TGFB1-202ENST00000597453 WDR83Q9BRX9 315 aaKnown RBP14.45□□□□□ -0.1
TGFB1-202ENST00000597453 CRB3Q9BUF7 120 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 SEMA3GQ9NS98 782 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 CUEDC1Q9NWM3 386 aaPredicted RBP14.45□□□□□ -0.1
TGFB1-202ENST00000597453 ERRFI1Q9UJM3 462 aaPredicted RBP14.45□□□□□ -0.1
TGFB1-202ENST00000597453 MED16Q9Y2X0 877 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 TEX264Q9Y6I9 313 aa14.45□□□□□ -0.1
TGFB1-202ENST00000597453 A1L4Q6 167 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 E5RI56 91 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 H0YGG7 62 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 ELK3P41970 407 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 SLC1A2P43004 574 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 GLRBP48167 497 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 ARF3P61204 181 aaPredicted RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 TSTA3Q13630 321 aaPredicted RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 PRTGQ2VWP7 1150 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 VWA2Q5GFL6 755 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 C8orf74Q6P047 294 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 PRMT9Q6P2P2 845 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 IGFL2Q6UWQ7 119 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 PAQR7Q86WK9 346 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 DENND6AQ8IWF6 608 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 PPFIBP2Q8ND30 876 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 GABPB2Q8TAK5 448 aaPredicted RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 SMPDL3AQ92484 453 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 BARD1Q99728 777 aaKnown RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 PLCD4Q9BRC7 762 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 PLAC1Q9HBJ0 212 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 MRPS30Q9NP92 439 aaKnown RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 FBXO6Q9NRD1 293 aaPredicted RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 GRHL1Q9NZI5 618 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 NOVA2Q9UNW9 492 aaKnown RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 CHMP2BQ9UQN3 213 aa14.44□□□□□ -0.1
TGFB1-202ENST00000597453 COPG1Q9Y678 874 aaKnown RBP14.44□□□□□ -0.1
TGFB1-202ENST00000597453 IGLV3-12A0A075B6K2 115 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 FFAR3O14843 346 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 GPR42O15529 346 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 CATP04040 527 aaKnown RBP14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ZGLP1P0C6A0 271 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ERVK-10P10266 1014 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 FBLP22087 321 aaKnown RBP14.43□□□□□ -0.1
TGFB1-202ENST00000597453 RPA3P35244 121 aaPredicted RBP14.43□□□□□ -0.1
TGFB1-202ENST00000597453 PNLIPRP1P54315 467 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 PDIA2Q13087 525 aaKnown RBP14.43□□□□□ -0.1
TGFB1-202ENST00000597453 CTBP1Q13363 440 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 CUL1Q13616 776 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 MUM1Q2TAK8 710 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 HKDC1Q2TB90 917 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 HSP90AA5PQ58FG0 334 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 AGAP7PQ5VUJ5 663 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ICE2Q659A1 982 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 STEAP4Q687X5 459 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ZNF425Q6IV72 752 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ZNF549Q6P9A3 640 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 LAPTM4BQ86VI4 370 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ZGRF1Q86YA3 2104 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 MNS1Q8NEH6 495 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 PPP4R1Q8TF05 950 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 ZNF480Q8WV37 535 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 MIEF2Q96C03 454 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 C8orf44Q96CB5 159 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 CERS2Q96G23 380 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 THOC3Q96J01 351 aaKnown RBP14.43□□□□□ -0.1
TGFB1-202ENST00000597453 CABS1Q96KC9 395 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 AGAP4Q96P64 663 aa14.43□□□□□ -0.1
TGFB1-202ENST00000597453 LHPPQ9H008 270 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms