RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 VSX2P58304 361 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 C18orf21Q32NC0 220 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 TCTE1Q5JU00 501 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 TLDC1Q6P9B6 456 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 TIFABQ6ZNK6 161 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 PLD6Q8N2A8 252 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 ZNF655Q8N720 491 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 PDPRQ8NCN5 879 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 RHEBL1Q8TAI7 183 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 SLC22A14Q9Y267 594 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 AP1M2Q9Y6Q5 423 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 ITPR1Q14643 2758 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 UBXN8O00124 270 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 HAT1O14929 419 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 ZSCAN9O15535 394 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 SRPX2O60687 465 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 RFPL1O75677 317 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 IPO13O94829 963 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 CTSBP07858 339 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 ITPKBP27987 946 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 GRK3P35626 688 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 KCNC1P48547 511 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 IFFO1Q0D2I5 559 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 FRMPD2BQ6IN97 320 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 VASH2Q86V25 355 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 TDRPQ86YL5 185 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 TTC29Q8NA56 475 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 EPS8L3Q8TE67 593 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 SLC5A11Q8WWX8 675 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 OR4K3Q96R72 315 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 TMEM79Q9BSE2 394 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 ZNF358Q9NW07 568 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 KCNE2Q9Y6J6 123 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 CELSR3Q9NYQ7 3312 aa18.83■□□□□ 0.6
SHKBP1-214ENST00000597396 TAPBPO15533 448 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 EIF2S1P05198 315 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 KLK3P07288 261 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 RBP1P09455 135 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 NUDT17P0C025 328 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 GDF5P43026 501 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 SLC6A12P48065 614 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 HSPA7P48741 367 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 CCR8P51685 355 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 CSNK1G2P78368 415 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 ABHD18Q0P651 414 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 FBXO48Q5FWF7 155 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 TECRLQ5HYJ1 363 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 FBXO42Q6P3S6 717 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 PLD3Q8IV08 490 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 KLHDC8AQ8IYD2 350 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 OR2W6PQ8NHA6 318 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 RERGQ96A58 199 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 ESAMQ96AP7 390 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 KIAA1143Q96AT1 154 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 GPR78Q96P69 363 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 CCNL2Q96S94 520 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 NDC1Q9BTX1 674 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 TXLNGQ9NUQ3 528 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 CPSF2Q9P2I0 782 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 PTBP2Q9UKA9 531 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 PADI1Q9ULC6 663 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 SRPK3Q9UPE1 567 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 CCDC88CQ9P219 2028 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 BAHCC1Q9P281 2608 aa18.82■□□□□ 0.6
SHKBP1-214ENST00000597396 LOC105369274A0A096LPK9 316 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 LOC102723532A0A0G2JNH3 316 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 TLDC2A0PJX2 215 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 H0YGG7 62 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 H3BMH7 237 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 CCNT2O60583 730 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 CDH16O75309 829 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 STK16O75716 305 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 GFAPP14136 432 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 KRT15P19012 456 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 GGT5P36269 586 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 STAT5AP42229 794 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 ARF3P61204 181 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 RPS15AP62244 130 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 RELAQ04206 551 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 TLE3Q04726 772 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 GPS2Q13227 327 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 GRM7Q14831 915 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 WASHC2DQ5SRD0 308 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 TMPRSS11BQ86T26 416 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 OR4N4Q8N0Y3 316 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 MREGQ8N565 214 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 SNX31Q8N9S9 440 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 ACMSDQ8TDX5 336 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 MR1Q95460 341 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 NEIL2Q969S2 332 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 LHX9Q9NQ69 397 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 STARD5Q9NSY2 213 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 DNAJC11Q9NVH1 559 aa18.81■□□□□ 0.6
SHKBP1-214ENST00000597396 LOC101059948A0A1B0GTJ6 334 aa18.8■□□□□ 0.6
SHKBP1-214ENST00000597396 GOLGA8RI6L899 631 aa18.8■□□□□ 0.6
SHKBP1-214ENST00000597396 MAP2K7O14733 419 aa18.8■□□□□ 0.6
SHKBP1-214ENST00000597396 ARSFP54793 590 aa18.8■□□□□ 0.6
SHKBP1-214ENST00000597396 UCNP55089 124 aa18.8■□□□□ 0.6
SHKBP1-214ENST00000597396 CDC16Q13042 620 aa18.8■□□□□ 0.6
SHKBP1-214ENST00000597396 RASA2Q15283 850 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms